FFCP PHASE1:Hg19::chr3:60066546..60066613,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2272 | |EntrezGene=2272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3701 | |HGNC=3701 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466788_5end | |association_with_transcript=0bp_to_ENST00000466788_5end | ||
|cluster_id=chr3:60066546..60066613,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_FHIT_5end | |description=CAGE_peak_2_at_FHIT_5end | ||
|id=chr3:60066546..60066613,- | |id=chr3:60066546..60066613,- | ||
|ontology_enrichment_celltype=CL:0000791!1.31e-22!18;CL:0000789!1.31e-22!18;CL:0002420!1.31e-22!18;CL:0002419!1.31e-22!18;CL:0000790!1.31e-22!18;CL:0000838!1.64e-20!52;CL:0000084!1.91e-20!25;CL:0000827!1.91e-20!25;CL:0000542!6.47e-20!53;CL:0000051!6.47e-20!53;CL:0002087!9.39e-17!119;CL:0000625!7.61e-16!11;CL:0000738!5.73e-15!140;CL:0002031!1.14e-12!124;CL:0000037!1.39e-10!172;CL:0000566!1.39e-10!172;CL:0000624!4.27e-10!6;CL:0000988!3.51e-09!182;CL:0002032!2.00e-08!165;CL:0000837!2.00e-08!165 | |ontology_enrichment_celltype=CL:0000791!1.31e-22!18;CL:0000789!1.31e-22!18;CL:0002420!1.31e-22!18;CL:0002419!1.31e-22!18;CL:0000790!1.31e-22!18;CL:0000838!1.64e-20!52;CL:0000084!1.91e-20!25;CL:0000827!1.91e-20!25;CL:0000542!6.47e-20!53;CL:0000051!6.47e-20!53;CL:0002087!9.39e-17!119;CL:0000625!7.61e-16!11;CL:0000738!5.73e-15!140;CL:0002031!1.14e-12!124;CL:0000037!1.39e-10!172;CL:0000566!1.39e-10!172;CL:0000624!4.27e-10!6;CL:0000988!3.51e-09!182;CL:0002032!2.00e-08!165;CL:0000837!2.00e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.09e-41;18!CL:0000789;3.09e-41;18!CL:0002419;3.09e-41;18!CL:0000084;3.02e-35;25!CL:0000625;4.06e-28;11!CL:0000624;1.99e-17;6!CL:0000542;4.73e-15;53!CL:0000226;2.49e-09;3!CL:0000842;2.49e-09;3!CL:0000623;2.56e-09;3!CL:0000898;2.79e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.81e-41,18;CL:0000789,2.81e-41,18;CL:0002420,2.81e-41,18;CL:0002419,2.81e-41,18;CL:0000790,2.81e-41,18;CL:0000084,2.69e-35,25;CL:0000827,2.69e-35,25;CL:0000838,2.57e-28,52;CL:0000625,3.71e-28,11;CL:0000542,1.22e-27,53;CL:0000051,1.22e-27,53;CL:0002087,1.11e-17,115;CL:0000624,1.96e-17,6;CL:0000738,1.35e-14,136;CL:0002031,6.24e-13,120;CL:0000037,8.42e-12,168;CL:0000988,9.67e-11,177;CL:0000226,2.46e-09,3;CL:0000842,2.46e-09,3;CL:0000623,2.53e-09,3;CL:0000825,2.53e-09,3;CL:0000898,2.75e-09,3;CL:0002032,3.93e-09,161;CL:0000837,3.93e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;3.09e-41;18!CL:0000051;4.73e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-16!115;UBERON:0000178!4.91e-13!15;UBERON:0000179!4.91e-13!15;UBERON:0000463!4.91e-13!15;UBERON:0002390!2.79e-07!102;UBERON:0003061!2.79e-07!102;UBERON:0002193!4.79e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.03e-24;15!UBERON:0000179;5.03e-24;15!UBERON:0000463;5.03e-24;15!UBERON:0002390;2.22e-18;32!UBERON:0002193;1.86e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.83e-24,15;UBERON:0000179,4.83e-24,15;UBERON:0000463,4.83e-24,15;UBERON:0002193,1.35e-08,108;UBERON:0002390,3.70e-08,98;UBERON:0003061,3.70e-08,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.928896739896456,0,0,0,1.00707360754392,1.70603078984906,4.11040615068786,7.20194031091441,5.01361118675354,13.8886957258145,0.223915474239924,1.29557466407592,0,0,0.377875943688809,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,1.24564449799115,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,0.661044872784862,0,0,1.76171156811282,0.382273228125229,0,5.04457706683382,2.89722493252585,107.993663792494,65.6327973791105,37.8306758159097,6.01871383406441,18.9034914647482,30.3006595670229,1.94826728407911,1.33692548262208,11.1950244840438,18.8303810396078,15.1650163708409,3.97083091149593,1.56071217071854,12.3328428452757,5.52700035571697,15.9391697154279,150.659148172653,188.081202147068,68.9934457112847,4.75899239329778,63.231381444317,50.8568619314292,31.1214221183989,26.7594948032241,5.85975108470777,4.75226022224187,31.169049649099,33.9164519559209,27.4847598415161,30.7810427657222,12.3169199538157,3.42731463482045,1.60464117470104,7.09639579025715,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4615066630197,15.9564405396043,27.0803806550269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0263856457419,43.5742685653606,18.9975052890131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0,7.10426652925037,7.64637207142375,14.2411796793541,23.5849457703211,19.3340268350511,12.3209929126616,12.4207230564766,11.1037524681198,0,0,0,0,0.865615277858669,0,1.59426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,1.65770349318689,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.468528891450678,1.82454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,23.0529234318501,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.410716136675979,1.27746588066972,0.859530882839914,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,8.43482237080316,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,1.70685094975177,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0.297046400327086,0,0,0.657887425858975,1.93373663920732,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,4.2628680491764,3.35203457197633,0,0,0,0.217716747896961,0,4.71464371102113,1.14755528628282,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.928896739896456,0,0,0,1.00707360754392,1.70603078984906,4.11040615068786,7.20194031091441,5.01361118675354,13.8886957258145,0.223915474239924,1.29557466407592,0,0,0.377875943688809,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,1.24564449799115,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,0.661044872784862,0,0,1.76171156811282,0.382273228125229,0,5.04457706683382,2.89722493252585,107.993663792494,65.6327973791105,37.8306758159097,6.01871383406441,18.9034914647482,30.3006595670229,1.94826728407911,1.33692548262208,11.1950244840438,18.8303810396078,15.1650163708409,3.97083091149593,1.56071217071854,12.3328428452757,5.52700035571697,15.9391697154279,150.659148172653,188.081202147068,68.9934457112847,4.75899239329778,63.231381444317,50.8568619314292,31.1214221183989,26.7594948032241,5.85975108470777,4.75226022224187,31.169049649099,33.9164519559209,27.4847598415161,30.7810427657222,12.3169199538157,3.42731463482045,1.60464117470104,7.09639579025715,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4615066630197,15.9564405396043,27.0803806550269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0263856457419,43.5742685653606,18.9975052890131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0,7.10426652925037,7.64637207142375,14.2411796793541,23.5849457703211,19.3340268350511,12.3209929126616,12.4207230564766,11.1037524681198,0,0,0,0,0.865615277858669,0,1.59426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,1.65770349318689,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.468528891450678,1.82454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,23.0529234318501,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.410716136675979,1.27746588066972,0.859530882839914,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,8.43482237080316,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,1.70685094975177,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0.297046400327086,0,0,0.657887425858975,1.93373663920732,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,4.2628680491764,3.35203457197633,0,0,0,0.217716747896961,0,4.71464371102113,1.14755528628282,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,2.01273793591026,0 | ||
|short_description=p2@FHIT | |short_description=p2@FHIT | ||
}} | }} |
Latest revision as of 07:21, 19 September 2015
Short description: | p2@FHIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FHIT_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000466788_5end |
EntrezGene: | FHIT |
HGNC: | 3701 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.81e-41 | 18 |
alpha-beta T cell | 2.81e-41 | 18 |
immature T cell | 2.81e-41 | 18 |
mature T cell | 2.81e-41 | 18 |
immature alpha-beta T cell | 2.81e-41 | 18 |
T cell | 2.69e-35 | 25 |
pro-T cell | 2.69e-35 | 25 |
lymphoid lineage restricted progenitor cell | 2.57e-28 | 52 |
CD8-positive, alpha-beta T cell | 3.71e-28 | 11 |
lymphocyte | 1.22e-27 | 53 |
common lymphoid progenitor | 1.22e-27 | 53 |
nongranular leukocyte | 1.11e-17 | 115 |
CD4-positive, alpha-beta T cell | 1.96e-17 | 6 |
leukocyte | 1.35e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 6.24e-13 | 120 |
hematopoietic stem cell | 8.42e-12 | 168 |
hematopoietic cell | 9.67e-11 | 177 |
single nucleate cell | 2.46e-09 | 3 |
mononuclear cell | 2.46e-09 | 3 |
natural killer cell | 2.53e-09 | 3 |
pro-NK cell | 2.53e-09 | 3 |
naive T cell | 2.75e-09 | 3 |
hematopoietic oligopotent progenitor cell | 3.93e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.93e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 4.83e-24 | 15 |
haemolymphatic fluid | 4.83e-24 | 15 |
organism substance | 4.83e-24 | 15 |
hemolymphoid system | 1.35e-08 | 108 |
hematopoietic system | 3.70e-08 | 98 |
blood island | 3.70e-08 | 98 |