FFCP PHASE1:Hg19::chr2:197791423..197791438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80055 | |EntrezGene=80055 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25712 | |HGNC=25712 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESR7,Q75T13 | |UniProt=E7ESR7,Q75T13 | ||
|association_with_transcript=15bp_to_ENST00000409475,ENST00000422382,NM_024989,uc002utw.2,uc002utx.2,uc002uty.1_5end | |association_with_transcript=15bp_to_ENST00000409475,ENST00000422382,NM_024989,uc002utw.2,uc002utx.2,uc002uty.1_5end | ||
|cluster_id=chr2:197791423..197791438,- | |||
|coexpression_cluster_id=C4166 | |coexpression_cluster_id=C4166 | ||
|description=CAGE_peak_2_at_PGAP1_5end | |description=CAGE_peak_2_at_PGAP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.34e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;5.34e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-29!82;UBERON:0000073!5.41e-29!94;UBERON:0001016!5.41e-29!94;UBERON:0005743!3.27e-28!86;UBERON:0001049!7.26e-27!57;UBERON:0005068!7.26e-27!57;UBERON:0006241!7.26e-27!57;UBERON:0007135!7.26e-27!57;UBERON:0000955!1.13e-25!69;UBERON:0006238!1.13e-25!69;UBERON:0002616!1.60e-25!59;UBERON:0002780!6.62e-23!41;UBERON:0001890!6.62e-23!41;UBERON:0006240!6.62e-23!41;UBERON:0003080!1.45e-22!42;UBERON:0000924!3.58e-22!173;UBERON:0006601!3.58e-22!173;UBERON:0002346!1.03e-21!90;UBERON:0004121!1.41e-20!169;UBERON:0003075!5.98e-20!86;UBERON:0007284!5.98e-20!86;UBERON:0000153!7.33e-20!129;UBERON:0007811!7.33e-20!129;UBERON:0002020!1.68e-19!34;UBERON:0003528!1.68e-19!34;UBERON:0001893!2.68e-19!34;UBERON:0000033!3.80e-19!123;UBERON:0002791!1.00e-18!33;UBERON:0001869!1.08e-18!32;UBERON:0003056!8.30e-17!61;UBERON:0000956!7.87e-15!25;UBERON:0000203!7.87e-15!25;UBERON:0002619!2.95e-13!22;UBERON:0001950!5.28e-12!20;UBERON:0007023!3.67e-11!115;UBERON:0000468!7.03e-08!659;UBERON:0000922!1.13e-07!612;UBERON:0000062!4.93e-07!511;UBERON:0002050!8.97e-07!605;UBERON:0005423!8.97e-07!605;UBERON:0000475!9.77e-07!365;UBERON:0000480!9.85e-07!626 | |ontology_enrichment_uberon=UBERON:0001017!2.22e-29!82;UBERON:0000073!5.41e-29!94;UBERON:0001016!5.41e-29!94;UBERON:0005743!3.27e-28!86;UBERON:0001049!7.26e-27!57;UBERON:0005068!7.26e-27!57;UBERON:0006241!7.26e-27!57;UBERON:0007135!7.26e-27!57;UBERON:0000955!1.13e-25!69;UBERON:0006238!1.13e-25!69;UBERON:0002616!1.60e-25!59;UBERON:0002780!6.62e-23!41;UBERON:0001890!6.62e-23!41;UBERON:0006240!6.62e-23!41;UBERON:0003080!1.45e-22!42;UBERON:0000924!3.58e-22!173;UBERON:0006601!3.58e-22!173;UBERON:0002346!1.03e-21!90;UBERON:0004121!1.41e-20!169;UBERON:0003075!5.98e-20!86;UBERON:0007284!5.98e-20!86;UBERON:0000153!7.33e-20!129;UBERON:0007811!7.33e-20!129;UBERON:0002020!1.68e-19!34;UBERON:0003528!1.68e-19!34;UBERON:0001893!2.68e-19!34;UBERON:0000033!3.80e-19!123;UBERON:0002791!1.00e-18!33;UBERON:0001869!1.08e-18!32;UBERON:0003056!8.30e-17!61;UBERON:0000956!7.87e-15!25;UBERON:0000203!7.87e-15!25;UBERON:0002619!2.95e-13!22;UBERON:0001950!5.28e-12!20;UBERON:0007023!3.67e-11!115;UBERON:0000468!7.03e-08!659;UBERON:0000922!1.13e-07!612;UBERON:0000062!4.93e-07!511;UBERON:0002050!8.97e-07!605;UBERON:0005423!8.97e-07!605;UBERON:0000475!9.77e-07!365;UBERON:0000480!9.85e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.41e-22;32!UBERON:0003528;4.35e-22;34!UBERON:0002020;4.35e-22;34!UBERON:0002791;7.29e-22;32!UBERON:0001893;2.24e-21;34!UBERON:0002780;2.99e-21;41!UBERON:0001890;2.99e-21;41!UBERON:0000956;2.09e-19;25!UBERON:0000203;2.09e-19;25!UBERON:0000073;6.55e-19;53!UBERON:0002616;6.55e-19;53!UBERON:0002619;2.55e-17;22!UBERON:0001950;1.17e-15;20!UBERON:0001017;2.29e-14;75!UBERON:0000955;1.64e-13;68!UBERON:0001016;1.80e-13;83!UBERON:0002420;1.35e-07;9!UBERON:0007245;1.35e-07;9!UBERON:0010009;1.35e-07;9!UBERON:0010011;1.35e-07;9!UBERON:0000454;1.35e-07;9!UBERON:0000125;3.06e-07;9!UBERON:0002308;3.06e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001869;3.41e-22;32!UBERON:0003528;4.35e-22;34!UBERON:0002020;4.35e-22;34!UBERON:0002791;7.29e-22;32!UBERON:0001893;2.24e-21;34!UBERON:0002780;2.99e-21;41!UBERON:0001890;2.99e-21;41!UBERON:0000956;2.09e-19;25!UBERON:0000203;2.09e-19;25!UBERON:0000073;6.55e-19;53!UBERON:0002616;6.55e-19;53!UBERON:0002619;2.55e-17;22!UBERON:0001950;1.17e-15;20!UBERON:0001017;2.29e-14;75!UBERON:0000955;1.64e-13;68!UBERON:0001016;1.80e-13;83!UBERON:0002420;1.35e-07;9!UBERON:0007245;1.35e-07;9!UBERON:0010009;1.35e-07;9!UBERON:0010011;1.35e-07;9!UBERON:0000454;1.35e-07;9!UBERON:0000125;3.06e-07;9!UBERON:0002308;3.06e-07;9 | ||
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| ||
|short_description=p2@PGAP1 | |short_description=p2@PGAP1 | ||
}} | }} |
Latest revision as of 07:33, 19 September 2015
Short description: | p2@PGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PGAP1_5end |
Coexpression cluster: | C4166_neuroectodermal_Neural_small_Neurons_occipital_parietal_duodenum |
Association with transcript: | 15bp_to_ENST00000409475, ENST00000422382, NM_024989, uc002utw.2, uc002utx.2, uc002uty.1_5end |
EntrezGene: | PGAP1 |
HGNC: | 25712 |
UniProt: | E7ESR7Q75T13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data