FFCP PHASE1:Hg19::chr7:69289551..69289564,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr7:69289551..69289564,+ to FFCP PHASE1:Hg19::chr7:69289551..69289564,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26053 | |EntrezGene=26053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14262 | |HGNC=14262 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000476695_5end | |||
|cluster_id=chr7:69289551..69289564,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_20_at_AUTS2_5end | |||
|id=chr7:69289551..69289564,+ | |||
|ontology_enrichment_celltype=CL:0000945!7.65e-46!24;CL:0000826!7.65e-46!24;CL:0000838!3.25e-35!52;CL:0000542!2.06e-34!53;CL:0000051!2.06e-34!53;CL:0000236!3.14e-33!14;CL:0000738!9.84e-28!140;CL:0002087!8.07e-27!119;CL:0000037!1.16e-20!172;CL:0000566!1.16e-20!172;CL:0002031!1.40e-20!124;CL:0000988!5.77e-19!182;CL:0002032!1.54e-15!165;CL:0000837!1.54e-15!165;CL:0000784!1.15e-10!3;CL:0000842!3.17e-10!3;CL:0000224!9.21e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.19e-69;13!CL:0000945;7.42e-68;24!CL:0000784;1.60e-22;3!CL:0000542;9.57e-21;53!CL:0000226;1.77e-10;3!CL:0000842;1.77e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.60e-68,24;CL:0000826,5.60e-68,24;CL:0000236,2.35e-64,14;CL:0000838,6.77e-30,52;CL:0000542,2.80e-29,53;CL:0000051,2.80e-29,53;CL:0000784,1.60e-22,3;CL:0000738,3.31e-20,136;CL:0002087,1.64e-17,115;CL:0000037,1.18e-15,168;CL:0000988,1.15e-14,177;CL:0002031,6.54e-13,120;CL:0000226,2.26e-10,3;CL:0000842,2.26e-10,3;CL:0002032,3.51e-10,161;CL:0000837,3.51e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000051;9.57e-21;53!UBERON:0004872;4.62e-10;7!UBERON:0001045;7.75e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!8.69e-11!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.98e-11!7;UBERON:0002106!1.48e-10!3;UBERON:0004854!1.48e-10!3;UBERON:0009034!1.48e-10!3;UBERON:0002095!1.48e-10!3;UBERON:0004782!1.48e-10!3;UBERON:0003281!1.48e-10!3;UBERON:0009664!1.48e-10!3;UBERON:0002296!1.48e-10!3;UBERON:0005602!1.48e-10!3;UBERON:0001179!1.48e-10!3;UBERON:0006293!1.48e-10!3;UBERON:0007023!6.04e-08!115;UBERON:0000178!4.67e-07!15;UBERON:0000179!4.67e-07!15;UBERON:0000463!4.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.67e-11;3!UBERON:0001154;7.75e-09;1!UBERON:0001153;7.75e-09;1!UBERON:0009854;7.75e-09;1!UBERON:0002372;1.13e-08;1!UBERON:0001961;1.13e-08;1!UBERON:0001744;1.13e-08;1!UBERON:0001042;1.13e-08;1!UBERON:0001735;1.13e-08;1!UBERON:0004177;7.70e-07;5!UBERON:0005057;7.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.06e-11,3;UBERON:0004854,8.06e-11,3;UBERON:0009034,8.06e-11,3;UBERON:0002095,8.06e-11,3;UBERON:0004782,8.06e-11,3;UBERON:0003281,8.06e-11,3;UBERON:0009664,8.06e-11,3;UBERON:0002296,8.06e-11,3;UBERON:0005602,8.06e-11,3;UBERON:0001179,8.06e-11,3;UBERON:0006293,8.06e-11,3;UBERON:0001154,8.36e-09,1;UBERON:0001153,8.36e-09,1;UBERON:0001045,8.36e-09,1;UBERON:0002372,1.22e-08,1;UBERON:0001961,1.22e-08,1;UBERON:0001744,1.22e-08,1;UBERON:0001735,1.22e-08,1 | |||
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| ||
|short_description=p20@AUTS2 | |||
}} | }} |
Latest revision as of 07:48, 19 September 2015
Short description: | p20@AUTS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_AUTS2_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -47bp_to_ENST00000476695_5end |
EntrezGene: | AUTS2 |
HGNC: | 14262 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.60e-68 | 24 |
pro-B cell | 5.60e-68 | 24 |
B cell | 2.35e-64 | 14 |
lymphoid lineage restricted progenitor cell | 6.77e-30 | 52 |
lymphocyte | 2.80e-29 | 53 |
common lymphoid progenitor | 2.80e-29 | 53 |
plasmacytoid dendritic cell | 1.60e-22 | 3 |
leukocyte | 3.31e-20 | 136 |
nongranular leukocyte | 1.64e-17 | 115 |
hematopoietic stem cell | 1.18e-15 | 168 |
hematopoietic cell | 1.15e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 6.54e-13 | 120 |
single nucleate cell | 2.26e-10 | 3 |
mononuclear cell | 2.26e-10 | 3 |
hematopoietic oligopotent progenitor cell | 3.51e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.51e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.06e-11 | 3 |
gastrointestinal system mesentery | 8.06e-11 | 3 |
stomach region | 8.06e-11 | 3 |
mesentery | 8.06e-11 | 3 |
gastrointestinal system serosa | 8.06e-11 | 3 |
mesentery of stomach | 8.06e-11 | 3 |
gut mesentery | 8.06e-11 | 3 |
dorsal mesentery | 8.06e-11 | 3 |
dorsal mesogastrium | 8.06e-11 | 3 |
peritoneal cavity | 8.06e-11 | 3 |
spleen primordium | 8.06e-11 | 3 |
vermiform appendix | 8.36e-09 | 1 |
caecum | 8.36e-09 | 1 |
midgut | 8.36e-09 | 1 |
tonsil | 1.22e-08 | 1 |
mucosa-associated lymphoid tissue | 1.22e-08 | 1 |
lymphoid tissue | 1.22e-08 | 1 |
tonsillar ring | 1.22e-08 | 1 |