FFCP PHASE1:Hg19::chr17:27370003..27370010,+: Difference between revisions
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|id=chr17:27370003..27370010,+
|short_description=p7@PIPOX
|description=CAGE_peak_7_at_PIPOX_5end
|association_with_transcript=85bp_to_ENST00000323372,NM_016518,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51268 | |EntrezGene=51268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17804 | |HGNC=17804 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0Z9 | |UniProt=Q9P0Z9 | ||
|association_with_transcript=85bp_to_ENST00000323372,NM_016518,uc002hdr.1_5end | |||
|cluster_id=chr17:27370003..27370010,+ | |||
|coexpression_cluster_id=C1775 | |||
|description=CAGE_peak_7_at_PIPOX_5end | |||
|id=chr17:27370003..27370010,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.25e-19!5;CL:0000128!4.11e-13!7;CL:0000126!4.11e-13!7;CL:0000127!4.11e-13!7;CL:0002453!4.11e-13!7;CL:0002605!8.73e-12!3;CL:0000133!2.93e-10!59;CL:0002319!1.18e-09!25;CL:0000039!2.53e-09!7;CL:0000586!2.53e-09!7;CL:0000221!5.07e-08!71;CL:0000047!7.45e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.07e-29;7!CL:0000586;9.07e-29;7!CL:0002321;7.30e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.51e-29,7;CL:0000586,7.51e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.18e-20;10!UBERON:0005564;2.18e-20;10 | |||
|ontology_enrichment_disease=DOID:3095!9.96e-08!22;DOID:2994!9.96e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;4.34e-23;4!DOID:3095;1.95e-16;22!DOID:2994;1.95e-16;22!DOID:1325;1.19e-13;7!DOID:3904;1.19e-13;7!DOID:3905;7.77e-11;9!DOID:1324;7.30e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.14e-23,4;DOID:3095,1.77e-16,22;DOID:2994,1.77e-16,22;DOID:1325,1.31e-13,7;DOID:3904,1.31e-13,7;DOID:3905,8.37e-11,9;DOID:1324,7.63e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.38e-09!82;UBERON:0005743!5.76e-09!86;UBERON:0000073!6.53e-09!94;UBERON:0001016!6.53e-09!94;UBERON:0000473!3.76e-08!8;UBERON:0001049!1.73e-07!57;UBERON:0005068!1.73e-07!57;UBERON:0006241!1.73e-07!57;UBERON:0007135!1.73e-07!57;UBERON:0002298!1.83e-07!8;UBERON:0004733!2.25e-07!12;UBERON:0002028!2.25e-07!12;UBERON:0007277!2.25e-07!12;UBERON:0002616!3.76e-07!59;UBERON:0004732!8.80e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.80e-25;8!UBERON:0003135;1.32e-18;11!UBERON:0000991;4.44e-10;21!UBERON:0003101;1.19e-09;22!UBERON:0000079;1.19e-09;22!UBERON:0003133;3.73e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.37e-25,8;UBERON:0003135,1.17e-18,11;UBERON:0000991,4.17e-10,21;UBERON:0009196,4.17e-10,21;UBERON:0009117,4.17e-10,21;UBERON:0005564,4.17e-10,21;UBERON:0004176,1.12e-09,22;UBERON:0003101,1.12e-09,22;UBERON:0000079,1.12e-09,22;UBERON:0003133,9.90e-08,48 | |||
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| ||
|short_description=p7@PIPOX | |||
}} | }} |
Latest revision as of 08:03, 19 September 2015
Short description: | p7@PIPOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PIPOX_5end |
Coexpression cluster: | C1775_neuroblastoma_iPS_testicular_H9_HES3GFP_skeletal_Melanocyte |
Association with transcript: | 85bp_to_ENST00000323372, NM_016518, uc002hdr.1_5end |
EntrezGene: | PIPOX |
HGNC: | 17804 |
UniProt: | Q9P0Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.51e-29 | 7 |
germ cell | 7.51e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.37e-25 | 8 |
male reproductive organ | 1.17e-18 | 11 |
gonad | 4.17e-10 | 21 |
indifferent external genitalia | 4.17e-10 | 21 |
indifferent gonad | 4.17e-10 | 21 |
gonad primordium | 4.17e-10 | 21 |
external genitalia | 1.12e-09 | 22 |
male organism | 1.12e-09 | 22 |
male reproductive system | 1.12e-09 | 22 |
reproductive organ | 9.90e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.14e-23 | 4 |
germ cell and embryonal cancer | 1.77e-16 | 22 |
germ cell cancer | 1.77e-16 | 22 |
bronchus cancer | 1.31e-13 | 7 |
bronchogenic carcinoma | 1.31e-13 | 7 |
lung carcinoma | 8.37e-11 | 9 |
lung cancer | 7.63e-07 | 15 |