FFCP PHASE1:Hg19::chr17:27370022..27370051,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17804 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P0Z9 | |||
|association_with_transcript=104bp_to_ENST00000323372,NM_016518,uc002hdr.1_5end | |||
|cluster_id=chr17:27370022..27370051,+ | |||
|coexpression_cluster_id=C1775 | |||
|description=CAGE_peak_2_at_PIPOX_5end | |||
|id=chr17:27370022..27370051,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.46e-15!25;CL:0000128!7.49e-13!7;CL:0000126!7.49e-13!7;CL:0000127!7.49e-13!7;CL:0002453!7.49e-13!7;CL:0000133!1.38e-10!59;CL:0002322!2.01e-10!5;CL:0000095!1.06e-08!17;CL:0000123!1.06e-08!17;CL:0000221!1.09e-08!71;CL:0000047!1.29e-08!8;CL:0000540!2.08e-08!6;CL:0000031!2.08e-08!6;CL:0000404!2.08e-08!6;CL:0000243!2.44e-08!15;CL:0000125!2.44e-08!15;CL:0000030!2.44e-08!15;CL:0000339!2.44e-08!15;CL:0002605!9.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.88e-25;5!CL:0000128;2.34e-24;7!CL:0000126;2.34e-24;7!CL:0000127;2.34e-24;7!CL:0002319;1.20e-19;25!CL:0002605;3.35e-15;3!CL:0000540;1.14e-13;6!CL:0000404;1.14e-13;6!CL:0000039;7.31e-12;7!CL:0000586;7.31e-12;7!CL:0002321;1.41e-11;15!CL:0000243;1.09e-09;15!CL:0000125;1.09e-09;15!CL:0000095;1.32e-08;17!CL:0002603;3.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.19e-25,5;CL:0000128,1.83e-24,7;CL:0000126,1.83e-24,7;CL:0000127,1.83e-24,7;CL:0002453,1.83e-24,7;CL:0002319,8.89e-20,25;CL:0000133,5.14e-17,59;CL:0000047,1.95e-15,8;CL:0000221,3.12e-15,72;CL:0002605,3.19e-15,3;CL:0000540,9.98e-14,6;CL:0000031,9.98e-14,6;CL:0000404,9.98e-14,6;CL:0000039,8.18e-12,7;CL:0000586,8.18e-12,7;CL:0000243,9.91e-10,15;CL:0000125,9.91e-10,15;CL:0000030,9.91e-10,15;CL:0000339,9.91e-10,15;CL:0000333,1.39e-09,41;CL:0000095,1.22e-08,17;CL:0000123,1.22e-08,17;CL:0002603,3.21e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;1.14e-13;6!UBERON:0009117;1.35e-12;10!UBERON:0005564;1.35e-12;10!CL:0000133;4.56e-10;59!CL:0000339;1.09e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.18e-10;22!DOID:2994;2.18e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.28e-10,22;DOID:2994,2.28e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.99e-45!82;UBERON:0005743!6.39e-42!86;UBERON:0001049!9.76e-40!57;UBERON:0005068!9.76e-40!57;UBERON:0006241!9.76e-40!57;UBERON:0007135!9.76e-40!57;UBERON:0000073!1.99e-38!94;UBERON:0001016!1.99e-38!94;UBERON:0000955!2.86e-35!69;UBERON:0006238!2.86e-35!69;UBERON:0002616!6.57e-34!59;UBERON:0003075!2.92e-31!86;UBERON:0007284!2.92e-31!86;UBERON:0002346!1.25e-30!90;UBERON:0001893!2.23e-28!34;UBERON:0002020!2.31e-28!34;UBERON:0003528!2.31e-28!34;UBERON:0002780!3.87e-28!41;UBERON:0001890!3.87e-28!41;UBERON:0006240!3.87e-28!41;UBERON:0003080!2.90e-27!42;UBERON:0002791!5.08e-27!33;UBERON:0001869!7.88e-26!32;UBERON:0000033!3.05e-25!123;UBERON:0003056!1.27e-23!61;UBERON:0000153!2.36e-23!129;UBERON:0007811!2.36e-23!129;UBERON:0004121!6.62e-22!169;UBERON:0000924!6.91e-22!173;UBERON:0006601!6.91e-22!173;UBERON:0000956!1.33e-21!25;UBERON:0000203!1.33e-21!25;UBERON:0002619!4.47e-17!22;UBERON:0001950!1.73e-14!20;UBERON:0003076!1.63e-13!15;UBERON:0003057!1.63e-13!15;UBERON:0007023!2.34e-12!115;UBERON:0004733!3.49e-12!12;UBERON:0002028!3.49e-12!12;UBERON:0007277!3.49e-12!12;UBERON:0004732!4.56e-11!13;UBERON:0000200!4.54e-10!6;UBERON:0002298!1.53e-09!8;UBERON:0000025!2.00e-08!194;UBERON:0002680!2.50e-08!9;UBERON:0001895!2.50e-08!9;UBERON:0010092!2.50e-08!9;UBERON:0002308!3.60e-08!9;UBERON:0000125!3.60e-08!9;UBERON:0000488!6.52e-07!4;UBERON:0004111!9.77e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.19e-10;8!UBERON:0003135;1.46e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.41e-10,8;UBERON:0001016,7.14e-10,89;UBERON:0001017,9.91e-10,81;UBERON:0003135,1.57e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72369481307503,0.204000691244253,2.19418305034661,3.43483184557268,3.28498620174922,3.01302335027527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,0.221729397462564,0.43917392846563,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,8.90408054746046,10.4698516973973,10.3412609153871,6.3233243559376,12.868363394657,10.5843434131991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,3.014190529352,0,1.01056513432752,1.38895653772983,0.380508304469197,0,0,0,0,0,0,1.51183915378974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,0,0.773288812777695,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,1.51354460599453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0.425846237690326,0,0.921722292925374,0.223676107892416,0.500547425135725,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,14.7266902803103,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13070500632772,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.329663433524666,0.202210631562555,0,0,1.59045937961861,0.408610218334727,18.1651057765472,20.9059943627795,17.0330538591966,0,0,0.485996453264197,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,1.68067843270016,0.26446520348538,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,2.04170325125305,0.886068179966986,0.488105059607853,0.625954653532499,0.573409195690071,0.332787154610557,0.558867626472451,0.138348634936231,0.124980407962107,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,43.8771977777951,0,0,0,0.123935764259002,0,0,0,0,0,0,0.706521476061055,1.41696576325585,0.319267718114302,0,0.252071696221718,0.760729777106397,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,1.56215619722769,0,0.380494861163441,0,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0.475788130837822,0.328863867814245,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,3.9769708788558,0,0,4.85668152767528,0,11.6241389546339,0.154348316215889,0.874238242015829,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.475940431336403,0,0.5290268405154,0,0,0,16.2754688037252,2.95017044301978,0.253397002022874,20.6017436078803,13.8953050738091,18.1032952083644,3.0084904715085,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PIPOX | |||
}} |
Latest revision as of 08:03, 19 September 2015
Short description: | p2@PIPOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIPOX_5end |
Coexpression cluster: | C1775_neuroblastoma_iPS_testicular_H9_HES3GFP_skeletal_Melanocyte |
Association with transcript: | 104bp_to_ENST00000323372, NM_016518, uc002hdr.1_5end |
EntrezGene: | PIPOX |
HGNC: | 17804 |
UniProt: | Q9P0Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.19e-25 | 5 |
oligodendrocyte | 1.83e-24 | 7 |
macroglial cell | 1.83e-24 | 7 |
astrocyte | 1.83e-24 | 7 |
oligodendrocyte precursor cell | 1.83e-24 | 7 |
neural cell | 8.89e-20 | 25 |
neurectodermal cell | 5.14e-17 | 59 |
neuronal stem cell | 1.95e-15 | 8 |
ectodermal cell | 3.12e-15 | 72 |
astrocyte of the cerebral cortex | 3.19e-15 | 3 |
neuron | 9.98e-14 | 6 |
neuroblast | 9.98e-14 | 6 |
electrically signaling cell | 9.98e-14 | 6 |
germ line cell | 8.18e-12 | 7 |
germ cell | 8.18e-12 | 7 |
glial cell (sensu Vertebrata) | 9.91e-10 | 15 |
glial cell | 9.91e-10 | 15 |
glioblast | 9.91e-10 | 15 |
glioblast (sensu Vertebrata) | 9.91e-10 | 15 |
migratory neural crest cell | 1.39e-09 | 41 |
neuron associated cell | 1.22e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.22e-08 | 17 |
astrocyte of the cerebellum | 3.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 2.41e-10 | 8 |
nervous system | 7.14e-10 | 89 |
central nervous system | 9.91e-10 | 81 |
male reproductive organ | 1.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.28e-10 | 22 |
germ cell cancer | 2.28e-10 | 22 |