FFCP PHASE1:Hg19::chr18:32870260..32870293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=10778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=13065 | |HGNC=13065 | ||
|UniProt= | |TSSclassifier=strong | ||
|UniProt=NA | |||
|association_with_transcript=-6bp_to_ENST00000540308_5end | |association_with_transcript=-6bp_to_ENST00000540308_5end | ||
|cluster_id=chr18:32870260..32870293,+ | |||
|description=CAGE_peak_1_at_ZNF271_5end | |description=CAGE_peak_1_at_ZNF271_5end | ||
|id=chr18:32870260..32870293,+ | |id=chr18:32870260..32870293,+ | ||
|ontology_enrichment_celltype=CL:0000048!7.11e-09!430;CL:0000723!3.53e-08!436;CL:0000034!1.93e-07!444 | |ontology_enrichment_celltype=CL:0000048!7.11e-09!430;CL:0000723!3.53e-08!436;CL:0000034!1.93e-07!444 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.08e-08,427;CL:0000723,5.26e-08,433;CL:0000034,2.83e-07,441;CL:0000473,6.69e-07,48;CL:0000234,6.69e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.74e-09!167;UBERON:0001049!1.25e-07!57;UBERON:0005068!1.25e-07!57;UBERON:0006241!1.25e-07!57;UBERON:0007135!1.25e-07!57;UBERON:0002780!1.80e-07!41;UBERON:0001890!1.80e-07!41;UBERON:0006240!1.80e-07!41;UBERON:0003080!4.18e-07!42;UBERON:0002616!4.70e-07!59;UBERON:0004765!7.91e-07!101;UBERON:0001434!7.91e-07!101 | |ontology_enrichment_uberon=UBERON:0002204!9.74e-09!167;UBERON:0001049!1.25e-07!57;UBERON:0005068!1.25e-07!57;UBERON:0006241!1.25e-07!57;UBERON:0007135!1.25e-07!57;UBERON:0002780!1.80e-07!41;UBERON:0001890!1.80e-07!41;UBERON:0006240!1.80e-07!41;UBERON:0003080!4.18e-07!42;UBERON:0002616!4.70e-07!59;UBERON:0004765!7.91e-07!101;UBERON:0001434!7.91e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.13e-08,167;UBERON:0001049,6.04e-08,56;UBERON:0005068,6.04e-08,56;UBERON:0006241,6.04e-08,56;UBERON:0007135,6.04e-08,56;UBERON:0002780,1.80e-07,41;UBERON:0001890,1.80e-07,41;UBERON:0003080,1.80e-07,41;UBERON:0006240,1.80e-07,41;UBERON:0000073,2.47e-07,53;UBERON:0002616,2.47e-07,53;UBERON:0010314,3.14e-07,132;UBERON:0000926,3.65e-07,315;UBERON:0004120,3.65e-07,315;UBERON:0006603,3.65e-07,315;UBERON:0001434,6.65e-07,100;UBERON:0002390,8.15e-07,98;UBERON:0003061,8.15e-07,98 | |||
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| ||
|short_description=p1@ZNF271 | |short_description=p1@ZNF271 | ||
}} | }} |
Latest revision as of 08:37, 19 September 2015
Short description: | p1@ZNF271 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF271_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000540308_5end |
EntrezGene: | ZNF271 |
HGNC: | 13065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.08e-08 | 427 |
somatic stem cell | 5.26e-08 | 433 |
stem cell | 2.83e-07 | 441 |
defensive cell | 6.69e-07 | 48 |
phagocyte | 6.69e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.13e-08 | 167 |
neural tube | 6.04e-08 | 56 |
neural rod | 6.04e-08 | 56 |
future spinal cord | 6.04e-08 | 56 |
neural keel | 6.04e-08 | 56 |
regional part of forebrain | 1.80e-07 | 41 |
forebrain | 1.80e-07 | 41 |
anterior neural tube | 1.80e-07 | 41 |
future forebrain | 1.80e-07 | 41 |
regional part of nervous system | 2.47e-07 | 53 |
regional part of brain | 2.47e-07 | 53 |
structure with developmental contribution from neural crest | 3.14e-07 | 132 |
mesoderm | 3.65e-07 | 315 |
mesoderm-derived structure | 3.65e-07 | 315 |
presumptive mesoderm | 3.65e-07 | 315 |
skeletal system | 6.65e-07 | 100 |
hematopoietic system | 8.15e-07 | 98 |
blood island | 8.15e-07 | 98 |