FFCP PHASE1:Hg19::chr1:190446662..190446678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339479 | |EntrezGene=339479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22393 | |HGNC=22393 | ||
|TSSclassifier=strong | |||
|UniProt=Q76B58 | |UniProt=Q76B58 | ||
|association_with_transcript=80bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | |association_with_transcript=80bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | ||
|cluster_id=chr1:190446662..190446678,- | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_6_at_FAM5C_5end | |description=CAGE_peak_6_at_FAM5C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | |ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | |ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | |ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4;DOID:7,6.83e-08,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001911;7.35e-18;4!UBERON:0000310;5.73e-08;10!UBERON:0001443;2.32e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001911;7.35e-18;4!UBERON:0000310;5.73e-08;10!UBERON:0001443;2.32e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000076,1.24e-09,8;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11 | |||
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| ||
|short_description=p6@FAM5C | |short_description=p6@FAM5C | ||
}} | }} |
Latest revision as of 09:14, 19 September 2015
Short description: | p6@FAM5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM5C_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 80bp_to_ENST00000367462, NM_199051, uc001gse.1_5end |
EntrezGene: | FAM5C |
HGNC: | 22393 |
UniProt: | Q76B58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
external ectoderm | 1.24e-09 | 8 |
breast | 5.73e-08 | 10 |
chest | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |
disease of anatomical entity | 6.83e-08 | 39 |