FFCP PHASE1:Hg19::chr14:23834610..23834686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10278 | |EntrezGene=10278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16898 | |HGNC=16898 | ||
|TSSclassifier=strong | |||
|UniProt=O43281 | |UniProt=O43281 | ||
|association_with_transcript=155bp_to_ENST00000216733,NM_005864,NM_032459,uc001wjo.2,uc001wjp.2,uc010tnm.1_5end | |association_with_transcript=155bp_to_ENST00000216733,NM_005864,NM_032459,uc001wjo.2,uc001wjp.2,uc010tnm.1_5end | ||
|cluster_id=chr14:23834610..23834686,- | |||
|description=CAGE_peak_3_at_EFS_5end | |description=CAGE_peak_3_at_EFS_5end | ||
|id=chr14:23834610..23834686,- | |id=chr14:23834610..23834686,- | ||
|ontology_enrichment_celltype=CL:0002368!4.11e-07!13 | |ontology_enrichment_celltype=CL:0002368!4.11e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.30e-17;19!CL:0002577;3.72e-10;3!CL:0002541;8.05e-09;3!CL:0002536;2.11e-07;2!CL:0000575;9.60e-07;2 | |ontology_enrichment_celltype_v019=CL:0000349;6.30e-17;19!CL:0002577;3.72e-10;3!CL:0002541;8.05e-09;3!CL:0002536;2.11e-07;2!CL:0000575;9.60e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.05e-17,19;CL:0002577,3.84e-10,3;CL:0002541,9.62e-09,3;CL:0002536,2.11e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.61e-11!14;UBERON:0000158!4.61e-11!14;UBERON:0007023!8.94e-10!115;UBERON:0000464!1.95e-09!104;UBERON:0000924!3.32e-09!173;UBERON:0006601!3.32e-09!173;UBERON:0004121!4.90e-09!169;UBERON:0000165!9.39e-09!28;UBERON:0000930!9.39e-09!28;UBERON:0004119!1.42e-08!169;UBERON:0000925!1.42e-08!169;UBERON:0006595!1.42e-08!169;UBERON:0003124!1.74e-08!7;UBERON:0000475!2.62e-08!365;UBERON:0001004!3.28e-08!72;UBERON:0000078!8.48e-08!18;UBERON:0000064!1.15e-07!219;UBERON:0001444!2.70e-07!48;UBERON:0003102!2.77e-07!95;UBERON:0000161!5.29e-07!35;UBERON:0003135!5.82e-07!11;UBERON:0007196!6.49e-07!14;UBERON:0001558!6.49e-07!14 | |ontology_enrichment_uberon=UBERON:0005631!4.61e-11!14;UBERON:0000158!4.61e-11!14;UBERON:0007023!8.94e-10!115;UBERON:0000464!1.95e-09!104;UBERON:0000924!3.32e-09!173;UBERON:0006601!3.32e-09!173;UBERON:0004121!4.90e-09!169;UBERON:0000165!9.39e-09!28;UBERON:0000930!9.39e-09!28;UBERON:0004119!1.42e-08!169;UBERON:0000925!1.42e-08!169;UBERON:0006595!1.42e-08!169;UBERON:0003124!1.74e-08!7;UBERON:0000475!2.62e-08!365;UBERON:0001004!3.28e-08!72;UBERON:0000078!8.48e-08!18;UBERON:0000064!1.15e-07!219;UBERON:0001444!2.70e-07!48;UBERON:0003102!2.77e-07!95;UBERON:0000161!5.29e-07!35;UBERON:0003135!5.82e-07!11;UBERON:0007196!6.49e-07!14;UBERON:0001558!6.49e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.55e-18;24!UBERON:0005631;6.57e-18;10!UBERON:0000158;6.57e-18;10!UBERON:0001987;4.93e-13;4!UBERON:0000305;4.45e-11;7!UBERON:0003124;8.05e-09;3!UBERON:0000920;8.05e-09;3!UBERON:0001044;5.32e-08;6!UBERON:0003293;5.32e-08;6!UBERON:0003294;5.32e-08;6!UBERON:0010047;5.32e-08;6!UBERON:0003408;5.32e-08;6!UBERON:0000167;5.32e-08;6!UBERON:0001829;7.22e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000478;2.55e-18;24!UBERON:0005631;6.57e-18;10!UBERON:0000158;6.57e-18;10!UBERON:0001987;4.93e-13;4!UBERON:0000305;4.45e-11;7!UBERON:0003124;8.05e-09;3!UBERON:0000920;8.05e-09;3!UBERON:0001044;5.32e-08;6!UBERON:0003293;5.32e-08;6!UBERON:0003294;5.32e-08;6!UBERON:0010047;5.32e-08;6!UBERON:0003408;5.32e-08;6!UBERON:0000167;5.32e-08;6!UBERON:0001829;7.22e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.03e-28,14;UBERON:0000158,1.03e-28,14;UBERON:0003124,5.16e-20,7;UBERON:0000478,2.88e-18,24;UBERON:0001987,5.09e-13,4;UBERON:0004340,5.09e-13,4;UBERON:0000305,4.41e-11,7;UBERON:0004871,1.24e-09,8;UBERON:0000920,9.62e-09,3;UBERON:0001044,5.28e-08,6;UBERON:0003293,5.28e-08,6;UBERON:0003294,5.28e-08,6;UBERON:0010047,5.28e-08,6;UBERON:0000167,5.28e-08,6;UBERON:0004119,6.40e-07,160;UBERON:0000925,6.40e-07,160;UBERON:0006595,6.40e-07,160;UBERON:0000161,6.44e-07,36;UBERON:0000166,6.51e-07,22;UBERON:0001829,7.44e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,1.47440361900905,9.07141518364156,30.1449093539638,33.2346392567852,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.263504357079378,0.196468613246569,4.00724817121796,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0.504867548488229,0,0,0.355009592516614,0,0.169560592310488,0.386521706326594,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.301586917234893,0.925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,14.5501234294205,29.9583791118895,28.7270778663196,0,0,0,0,0,0,2.96836132889982,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0.601519410909855,0.368323955743585,0,0,0.131124414959424,0.902399225814824,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,7.83111688522689,0,0,1.72279661398852,1.30012049207304,0,0.290012154876366,0.308097234229289,0,0,0.107420244868274,0.435050081742686,0.170453254832202,0,0.330569830721956,0.576570202095319,0.127612712494584,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,1.34060455107157,2.17781969722645,7.53150406214233,0,3.36942951335251,6.65145230305014,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,11.4597352674091,14.8482340416319,12.5935887860685,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,5.20855522170466,18.6289799991897,1.44999915086959,3.86897724170699,0,0.236387681767936,0,0,0,0,0,0,0.552896299656123,0,0,0,3.06732237412927,1.38510465306835,0,6.45578932286568,11.8480090620899,14.7760425813931,6.69902435437031,1.28236630762607,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0.802577647298789,0,0,2.15231080825299,0,0.789168805698781,0,1.22429104652196,0.189559738885464,0,0,0,0,0,0,0,0,0,1.17590876897253,0.0870592065804026,0.698906672968121,0,0,0,0,4.94643984090939,0,1.35588444468319,0,0,0,8.60426084033133,0,0.213452994739353,0,0,0,0,0,0,2.12124631155116,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,8.38651802095763,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0.803765742325096,0.412618309791701,0.415440338029185,0,3.0952078182318,0.0607495566580247,3.35434687599266,0.0788057072991982,0.577000469484979,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0,0,0,0.747511887973863,0.78602152549833,1.65695622138878,0,0,0,1.91502377331055,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.372578417648301,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,1.04349012362347,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,2.48830904013189,0,0,0.157265941855896,0,0.33946505990805,0,0.123935764259002,0.558644917973244,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0.504143392443436,0.138314504928436,0,0,2.84628383652974,0,0.550285795565037,0.346576998451015,0,0,0,0.225630985047772,0,0,8.1191075289241,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,8.22386650285773,3.47347824872506,0,1.78867398695433,0,0,0,0,38.4081262804226,0,0,0,0,0,0,3.9246546425257,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0.3414369541879,3.45629830907046,10.7556839705069,0,0.0852134047591577,1.69354820076372,0,0,0,0,0,0,0,0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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,1.47440361900905,9.07141518364156,30.1449093539638,33.2346392567852,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.263504357079378,0.196468613246569,4.00724817121796,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0.504867548488229,0,0,0.355009592516614,0,0.169560592310488,0.386521706326594,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.301586917234893,0.925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,14.5501234294205,29.9583791118895,28.7270778663196,0,0,0,0,0,0,2.96836132889982,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0.601519410909855,0.368323955743585,0,0,0.131124414959424,0.902399225814824,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,7.83111688522689,0,0,1.72279661398852,1.30012049207304,0,0.290012154876366,0.308097234229289,0,0,0.107420244868274,0.435050081742686,0.170453254832202,0,0.330569830721956,0.576570202095319,0.127612712494584,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,1.34060455107157,2.17781969722645,7.53150406214233,0,3.36942951335251,6.65145230305014,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,11.4597352674091,14.8482340416319,12.5935887860685,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,5.20855522170466,18.6289799991897,1.44999915086959,3.86897724170699,0,0.236387681767936,0,0,0,0,0,0,0.552896299656123,0,0,0,3.06732237412927,1.38510465306835,0,6.45578932286568,11.8480090620899,14.7760425813931,6.69902435437031,1.28236630762607,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0.802577647298789,0,0,2.15231080825299,0,0.789168805698781,0,1.22429104652196,0.189559738885464,0,0,0,0,0,0,0,0,0,1.17590876897253,0.0870592065804026,0.698906672968121,0,0,0,0,4.94643984090939,0,1.35588444468319,0,0,0,8.60426084033133,0,0.213452994739353,0,0,0,0,0,0,2.12124631155116,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,8.38651802095763,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0.803765742325096,0.412618309791701,0.415440338029185,0,3.0952078182318,0.0607495566580247,3.35434687599266,0.0788057072991982,0.577000469484979,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0,0,0,0.747511887973863,0.78602152549833,1.65695622138878,0,0,0,1.91502377331055,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.372578417648301,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,1.04349012362347,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,2.48830904013189,0,0,0.157265941855896,0,0.33946505990805,0,0.123935764259002,0.558644917973244,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0.504143392443436,0.138314504928436,0,0,2.84628383652974,0,0.550285795565037,0.346576998451015,0,0,0,0.225630985047772,0,0,8.1191075289241,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,8.22386650285773,3.47347824872506,0,1.78867398695433,0,0,0,0,38.4081262804226,0,0,0,0,0,0,3.9246546425257,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0.3414369541879,3.45629830907046,10.7556839705069,0,0.0852134047591577,1.69354820076372,0,0,0,0,0,0,0,0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| ||
|short_description=p3@EFS | |short_description=p3@EFS | ||
}} | }} |
Latest revision as of 09:43, 19 September 2015
Short description: | p3@EFS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EFS_5end |
Coexpression cluster: | NA |
Association with transcript: | 155bp_to_ENST00000216733, NM_005864, NM_032459, uc001wjo.2, uc001wjp.2, uc010tnm.1_5end |
EntrezGene: | EFS |
HGNC: | 16898 |
UniProt: | O43281 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.05e-17 | 19 |
placental epithelial cell | 3.84e-10 | 3 |
chorionic membrane mesenchymal stem cell | 9.62e-09 | 3 |
amniotic epithelial cell | 2.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.03e-28 | 14 |
membranous layer | 1.03e-28 | 14 |
chorion | 5.16e-20 | 7 |
extraembryonic structure | 2.88e-18 | 24 |
placenta | 5.09e-13 | 4 |
allantois | 5.09e-13 | 4 |
amnion | 4.41e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.24e-09 | 8 |
egg chorion | 9.62e-09 | 3 |
saliva-secreting gland | 5.28e-08 | 6 |
gland of oral region | 5.28e-08 | 6 |
gland of foregut | 5.28e-08 | 6 |
oral gland | 5.28e-08 | 6 |
oral cavity | 5.28e-08 | 6 |
endoderm-derived structure | 6.40e-07 | 160 |
endoderm | 6.40e-07 | 160 |
presumptive endoderm | 6.40e-07 | 160 |
orifice | 6.44e-07 | 36 |
oral opening | 6.51e-07 | 22 |
major salivary gland | 7.44e-07 | 2 |