FFCP PHASE1:Hg19::chr18:3449720..3449749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000343820_5end | |association_with_transcript=18bp_to_ENST00000343820_5end | ||
|cluster_id=chr18:3449720..3449749,+ | |||
|coexpression_cluster_id=C65 | |coexpression_cluster_id=C65 | ||
|description=CAGE_peak_2_at_TGIF1_5end | |description=CAGE_peak_2_at_TGIF1_5end | ||
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|ontology_enrichment_celltype=CL:0000012!7.47e-15!682;CL:0000548!8.44e-15!679;CL:0000004!8.44e-15!679;CL:0000255!8.44e-15!679;CL:0000063!2.93e-14!578;CL:0000860!1.32e-11!45;CL:0002057!3.88e-11!42;CL:0000003!1.34e-10!722;CL:0002371!6.78e-10!591;CL:0000144!1.72e-09!625;CL:0000066!3.91e-09!254;CL:0002076!1.98e-08!43 | |ontology_enrichment_celltype=CL:0000012!7.47e-15!682;CL:0000548!8.44e-15!679;CL:0000004!8.44e-15!679;CL:0000255!8.44e-15!679;CL:0000063!2.93e-14!578;CL:0000860!1.32e-11!45;CL:0002057!3.88e-11!42;CL:0000003!1.34e-10!722;CL:0002371!6.78e-10!591;CL:0000144!1.72e-09!625;CL:0000066!3.91e-09!254;CL:0002076!1.98e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.11e-18;33!CL:0002057;4.11e-18;33!CL:0000473;3.68e-11;39!CL:0000234;3.68e-11;39!CL:0002076;4.99e-07;42 | |ontology_enrichment_celltype_v019=CL:0000860;4.11e-18;33!CL:0002057;4.11e-18;33!CL:0000473;3.68e-11;39!CL:0000234;3.68e-11;39!CL:0002076;4.99e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-12,42;CL:0002057,1.96e-12,42;CL:0000473,2.02e-09,48;CL:0000234,2.02e-09,48;CL:0002076,1.13e-08,42;CL:0000066,1.71e-08,253;CL:0002077,9.04e-07,34 | |||
|ontology_enrichment_development_v019=CL:0002057;3.97e-10;42 | |ontology_enrichment_development_v019=CL:0002057;3.97e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!5.17e-07!72 | |ontology_enrichment_uberon=UBERON:0001004!5.17e-07!72 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@TGIF1 | |short_description=p2@TGIF1 | ||
}} | }} |
Latest revision as of 10:16, 19 September 2015
Short description: | p2@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TGIF1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 18bp_to_ENST00000343820_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.96e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-12 | 42 |
defensive cell | 2.02e-09 | 48 |
phagocyte | 2.02e-09 | 48 |
endo-epithelial cell | 1.13e-08 | 42 |
epithelial cell | 1.71e-08 | 253 |
ecto-epithelial cell | 9.04e-07 | 34 |