FFCP PHASE1:Hg19::chr11:65407297..65407328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6494 | |EntrezGene=6494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |HGNC=10885 | ||
|TSSclassifier=strong | |||
|UniProt=F6RY50 | |UniProt=F6RY50 | ||
|association_with_transcript=-8bp_to_ENST00000527525_5end | |||
|cluster_id=chr11:65407297..65407328,+ | |||
|coexpression_cluster_id=C615 | |||
|description=CAGE_peak_6_at_SIPA1_5end | |||
|id=chr11:65407297..65407328,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.10e-51!53;CL:0000051!3.10e-51!53;CL:0000838!2.40e-50!52;CL:0000738!6.85e-47!140;CL:0002087!7.08e-43!119;CL:0000037!8.49e-36!172;CL:0000566!8.49e-36!172;CL:0002031!2.16e-34!124;CL:0000988!1.80e-32!182;CL:0002032!4.73e-32!165;CL:0000837!4.73e-32!165;CL:0000945!2.73e-26!24;CL:0000826!2.73e-26!24;CL:0000791!9.21e-26!18;CL:0000789!9.21e-26!18;CL:0002420!9.21e-26!18;CL:0002419!9.21e-26!18;CL:0000790!9.21e-26!18;CL:0000084!9.92e-21!25;CL:0000827!9.92e-21!25;CL:0000236!8.11e-18!14;CL:0000625!2.13e-17!11;CL:0000094!7.84e-13!8;CL:0000624!6.31e-09!6;CL:0000081!8.81e-09!11;CL:0000766!8.99e-08!76;CL:0000134!5.23e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.79e-39;18!CL:0000789;1.79e-39;18!CL:0002419;1.79e-39;18!CL:0000542;4.30e-34;53!CL:0000084;4.79e-30;25!CL:0000625;2.78e-26;11!CL:0000945;5.95e-26;24!CL:0000236;2.76e-22;13!CL:0000624;3.84e-13;6!CL:0000094;6.86e-12;8!CL:0002087;3.58e-10;104!CL:0000775;3.64e-09;3!CL:0000081;2.17e-08;11!CL:0000623;2.58e-08;3!CL:0000226;5.22e-08;3!CL:0000842;5.22e-08;3!CL:0000898;2.04e-07;3!CL:0000738;4.77e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.58e-62,52;CL:0000542,1.38e-60,53;CL:0000051,1.38e-60,53;CL:0000791,1.22e-39,18;CL:0000789,1.22e-39,18;CL:0002420,1.22e-39,18;CL:0002419,1.22e-39,18;CL:0000790,1.22e-39,18;CL:0000738,2.14e-33,136;CL:0000084,3.89e-30,25;CL:0000827,3.89e-30,25;CL:0002087,9.02e-29,115;CL:0000625,1.89e-26,11;CL:0000945,5.54e-26,24;CL:0000826,5.54e-26,24;CL:0000037,2.05e-24,168;CL:0000236,4.52e-24,14;CL:0002031,1.24e-22,120;CL:0000988,1.76e-22,177;CL:0002032,4.57e-21,161;CL:0000837,4.57e-21,161;CL:0000624,3.98e-13,6;CL:0000094,6.93e-12,8;CL:0000775,3.60e-09,3;CL:0000081,2.19e-08,11;CL:0000623,2.78e-08,3;CL:0000825,2.78e-08,3;CL:0000226,6.18e-08,3;CL:0000842,6.18e-08,3;CL:0000898,1.73e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.79e-39;18!CL:0000051;4.30e-34;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.81e-13!15;UBERON:0000179!8.81e-13!15;UBERON:0000463!8.81e-13!15;UBERON:0002390!1.29e-11!102;UBERON:0003061!1.29e-11!102;UBERON:0002193!4.00e-11!112;UBERON:0004177!1.55e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.08e-17;15!UBERON:0000179;6.08e-17;15!UBERON:0000463;6.08e-17;15!UBERON:0002390;1.02e-11;32!UBERON:0002193;2.62e-08;42!UBERON:0004177;3.56e-07;5!UBERON:0005057;3.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.45e-17,15;UBERON:0000179,6.45e-17,15;UBERON:0000463,6.45e-17,15;UBERON:0004177,5.20e-11,7;UBERON:0005057,5.20e-11,7;UBERON:0002370,3.85e-09,4;UBERON:0005058,3.85e-09,4;UBERON:0009113,3.85e-09,4;UBERON:0003295,3.85e-09,4;UBERON:0005562,3.85e-09,4 | |||
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| ||
|short_description=p6@SIPA1 | |||
}} | }} |
Latest revision as of 10:29, 19 September 2015
Short description: | p6@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SIPA1_5end |
Coexpression cluster: | C615_CD19_Neutrophils_Eosinophils_CD4_CD8_Natural_blood |
Association with transcript: | -8bp_to_ENST00000527525_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | F6RY50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.58e-62 | 52 |
lymphocyte | 1.38e-60 | 53 |
common lymphoid progenitor | 1.38e-60 | 53 |
mature alpha-beta T cell | 1.22e-39 | 18 |
alpha-beta T cell | 1.22e-39 | 18 |
immature T cell | 1.22e-39 | 18 |
mature T cell | 1.22e-39 | 18 |
immature alpha-beta T cell | 1.22e-39 | 18 |
leukocyte | 2.14e-33 | 136 |
T cell | 3.89e-30 | 25 |
pro-T cell | 3.89e-30 | 25 |
nongranular leukocyte | 9.02e-29 | 115 |
CD8-positive, alpha-beta T cell | 1.89e-26 | 11 |
lymphocyte of B lineage | 5.54e-26 | 24 |
pro-B cell | 5.54e-26 | 24 |
hematopoietic stem cell | 2.05e-24 | 168 |
B cell | 4.52e-24 | 14 |
hematopoietic lineage restricted progenitor cell | 1.24e-22 | 120 |
hematopoietic cell | 1.76e-22 | 177 |
hematopoietic oligopotent progenitor cell | 4.57e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.57e-21 | 161 |
CD4-positive, alpha-beta T cell | 3.98e-13 | 6 |
granulocyte | 6.93e-12 | 8 |
neutrophil | 3.60e-09 | 3 |
blood cell | 2.19e-08 | 11 |
natural killer cell | 2.78e-08 | 3 |
pro-NK cell | 2.78e-08 | 3 |
single nucleate cell | 6.18e-08 | 3 |
mononuclear cell | 6.18e-08 | 3 |
naive T cell | 1.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.45e-17 | 15 |
haemolymphatic fluid | 6.45e-17 | 15 |
organism substance | 6.45e-17 | 15 |
hemopoietic organ | 5.20e-11 | 7 |
immune organ | 5.20e-11 | 7 |
thymus | 3.85e-09 | 4 |
hemolymphoid system gland | 3.85e-09 | 4 |
thymic region | 3.85e-09 | 4 |
pharyngeal gland | 3.85e-09 | 4 |
thymus primordium | 3.85e-09 | 4 |