FFCP PHASE1:Hg19::chr5:98109470..98109495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285704 | |EntrezGene=285704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26896 | |HGNC=26896 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NW40 | |UniProt=Q6NW40 | ||
|association_with_transcript=131bp_to_ENST00000513185_5end | |association_with_transcript=131bp_to_ENST00000513185_5end | ||
|cluster_id=chr5:98109470..98109495,+ | |||
|coexpression_cluster_id=C952 | |||
|description=CAGE_peak_3_at_RGMB_5end | |description=CAGE_peak_3_at_RGMB_5end | ||
|id=chr5:98109470..98109495,+ | |id=chr5:98109470..98109495,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.47e-33!180;CL:0000057!4.47e-19!75;CL:0000680!2.66e-16!57;CL:0000056!2.66e-16!57;CL:0000355!2.66e-16!57;CL:0000183!3.00e-16!59;CL:0000220!2.02e-15!246;CL:0002321!2.89e-15!248;CL:0000187!1.00e-14!54;CL:0000192!2.71e-14!42;CL:0000514!2.71e-14!42;CL:0000359!3.28e-14!32;CL:0000222!4.61e-14!119;CL:0000393!1.75e-13!60;CL:0000211!1.75e-13!60;CL:0002620!6.92e-13!23 | |ontology_enrichment_celltype=CL:0000055!2.47e-33!180;CL:0000057!4.47e-19!75;CL:0000680!2.66e-16!57;CL:0000056!2.66e-16!57;CL:0000355!2.66e-16!57;CL:0000183!3.00e-16!59;CL:0000220!2.02e-15!246;CL:0002321!2.89e-15!248;CL:0000187!1.00e-14!54;CL:0000192!2.71e-14!42;CL:0000514!2.71e-14!42;CL:0000359!3.28e-14!32;CL:0000222!4.61e-14!119;CL:0000393!1.75e-13!60;CL:0000211!1.75e-13!60;CL:0002620!6.92e-13!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.69e-15;32!CL:0002620;8.78e-15;23!CL:0000192;1.72e-11;43!CL:0000187;3.78e-09;55!CL:0000057;1.74e-08;73!CL:0002539;3.53e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.74e-22,76;CL:0000680,7.38e-18,58;CL:0000056,7.38e-18,58;CL:0000355,7.38e-18,58;CL:0000187,4.66e-16,55;CL:0000359,7.61e-16,32;CL:0000192,1.39e-15,43;CL:0000514,1.39e-15,43;CL:0000222,9.52e-15,121;CL:0002620,9.78e-15,23;CL:0000393,3.34e-13,61;CL:0000211,3.34e-13,61;CL:0002321,6.94e-12,250;CL:0002539,3.49e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.72e-11;43!CL:0000355;6.26e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.25e-21!83;UBERON:0002329!5.25e-21!83;UBERON:0003077!5.25e-21!83;UBERON:0003059!5.25e-21!83;UBERON:0007282!5.25e-21!83;UBERON:0009618!5.25e-21!83;UBERON:0007285!5.25e-21!83;UBERON:0000475!2.05e-20!365;UBERON:0000486!1.98e-19!82;UBERON:0004290!2.94e-18!70;UBERON:0001637!1.96e-15!42;UBERON:0003509!1.96e-15!42;UBERON:0004572!1.96e-15!42;UBERON:0000119!4.78e-15!312;UBERON:0002049!1.76e-14!79;UBERON:0007798!1.76e-14!79;UBERON:0000483!3.29e-14!309;UBERON:0002199!3.33e-14!45;UBERON:0002416!3.33e-14!45;UBERON:0001134!5.04e-14!61;UBERON:0002036!5.04e-14!61;UBERON:0003082!5.04e-14!61;UBERON:0003102!6.52e-14!95;UBERON:0002385!9.97e-14!63;UBERON:0001015!9.97e-14!63;UBERON:0000383!9.97e-14!63;UBERON:0005256!1.53e-13!143;UBERON:0001981!3.46e-13!60;UBERON:0007500!3.46e-13!60;UBERON:0004537!3.46e-13!60;UBERON:0006965!3.46e-13!60;UBERON:0000055!3.96e-13!69;UBERON:0004872!4.74e-13!84;UBERON:0004573!9.99e-13!33;UBERON:0004571!9.99e-13!33;UBERON:0000481!1.03e-12!347;UBERON:0002097!1.12e-11!40;UBERON:0004535!4.25e-11!110;UBERON:0000467!4.83e-11!625;UBERON:0000480!6.27e-11!626;UBERON:0001009!2.14e-10!113;UBERON:0000468!4.77e-10!659;UBERON:0000490!2.34e-09!138;UBERON:0002100!7.82e-09!216;UBERON:0003914!2.30e-08!118;UBERON:0000477!3.32e-08!286;UBERON:0004111!5.06e-08!241;UBERON:0000947!5.51e-07!21;UBERON:0010191!5.51e-07!21;UBERON:0000025!5.89e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.54e-13;33!UBERON:0004571;5.54e-13;33!UBERON:0001637;3.76e-12;42!UBERON:0003509;3.76e-12;42!UBERON:0004572;3.76e-12;42!UBERON:0002097;1.37e-10;41!UBERON:0003102;2.16e-10;50!UBERON:0002199;2.21e-10;46!UBERON:0002416;2.21e-10;46!UBERON:0007500;7.66e-08;56!UBERON:0001981;7.66e-08;56!UBERON:0004537;7.66e-08;56!UBERON:0000947;1.20e-07;21!UBERON:0010191;1.20e-07;21!UBERON:0000055;2.83e-07;65!UBERON:0004237;3.53e-07;10!UBERON:0004695;3.53e-07;10!UBERON:0002111;3.53e-07;10!UBERON:0004178;3.53e-07;10!UBERON:0002049;3.62e-07;75!UBERON:0007798;3.62e-07;75!UBERON:0002067;7.99e-07;9 | |||
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| ||
|short_description=p3@RGMB | |short_description=p3@RGMB | ||
}} | }} |
Latest revision as of 10:41, 19 September 2015
Short description: | p3@RGMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RGMB_5end |
Coexpression cluster: | C952_basal_Fibroblast_tenocyte_Hair_Smooth_Preadipocyte_Myoblast |
Association with transcript: | 131bp_to_ENST00000513185_5end |
EntrezGene: | RGMB |
HGNC: | 26896 |
UniProt: | Q6NW40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.74e-22 | 76 |
muscle precursor cell | 7.38e-18 | 58 |
myoblast | 7.38e-18 | 58 |
multi-potent skeletal muscle stem cell | 7.38e-18 | 58 |
muscle cell | 4.66e-16 | 55 |
vascular associated smooth muscle cell | 7.61e-16 | 32 |
smooth muscle cell | 1.39e-15 | 43 |
smooth muscle myoblast | 1.39e-15 | 43 |
mesodermal cell | 9.52e-15 | 121 |
skin fibroblast | 9.78e-15 | 23 |
electrically responsive cell | 3.34e-13 | 61 |
electrically active cell | 3.34e-13 | 61 |
embryonic cell | 6.94e-12 | 250 |
aortic smooth muscle cell | 3.49e-07 | 10 |