FFCP PHASE1:Hg19::chrX:130423386..130423397,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3547 | |EntrezGene=3547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5948 | |HGNC=5948 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6C5 | |UniProt=Q8N6C5 | ||
|association_with_transcript=5bp_to_ENST00000370903,NM_001170961,NM_001170962,NM_001555,NM_205833_5end | |association_with_transcript=5bp_to_ENST00000370903,NM_001170961,NM_001170962,NM_001555,NM_205833_5end | ||
|cluster_id=chrX:130423386..130423397,- | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_6_at_IGSF1_5end | |description=CAGE_peak_6_at_IGSF1_5end | ||
|id=chrX:130423386..130423397,- | |id=chrX:130423386..130423397,- | ||
|ontology_enrichment_celltype=CL:0002322!2.03e-18!5 | |ontology_enrichment_celltype=CL:0002322!2.03e-18!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.43e-11;7!CL:0000586;9.43e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.99e-11,7;CL:0000586,8.99e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-20!57;UBERON:0005068!1.14e-20!57;UBERON:0006241!1.14e-20!57;UBERON:0007135!1.14e-20!57;UBERON:0007023!8.05e-20!115;UBERON:0003075!1.69e-18!86;UBERON:0007284!1.69e-18!86;UBERON:0005743!2.48e-18!86;UBERON:0001017!9.25e-18!82;UBERON:0002346!2.01e-17!90;UBERON:0000473!8.17e-17!8;UBERON:0003135!2.75e-16!11;UBERON:0000073!4.44e-16!94;UBERON:0001016!4.44e-16!94;UBERON:0002616!1.46e-15!59;UBERON:0000955!1.74e-12!69;UBERON:0006238!1.74e-12!69;UBERON:0002780!4.87e-12!41;UBERON:0001890!4.87e-12!41;UBERON:0006240!4.87e-12!41;UBERON:0003080!1.08e-11!42;UBERON:0003056!1.95e-11!61;UBERON:0003076!2.34e-11!15;UBERON:0003057!2.34e-11!15;UBERON:0000007!2.51e-09!2;UBERON:0001893!2.20e-08!34;UBERON:0004121!3.01e-08!169;UBERON:0000924!6.28e-08!173;UBERON:0006601!6.28e-08!173;UBERON:0000033!6.85e-08!123;UBERON:0003101!1.27e-07!22;UBERON:0000079!1.27e-07!22;UBERON:0004733!1.81e-07!12;UBERON:0002028!1.81e-07!12;UBERON:0007277!1.81e-07!12;UBERON:0000153!2.56e-07!129;UBERON:0007811!2.56e-07!129;UBERON:0001869!3.00e-07!32;UBERON:0002791!4.57e-07!33;UBERON:0004732!7.19e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.43e-131;2!UBERON:0003296;2.83e-66;4!UBERON:0010133;2.83e-66;4!UBERON:0001894;1.64e-38;7!UBERON:0000473;1.41e-09;8!UBERON:0002368;1.22e-08;33!UBERON:0003135;2.55e-07;11!UBERON:0002780;4.38e-07;41!UBERON:0001890;4.38e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.99e-131,2;UBERON:0003296,3.35e-66,4;UBERON:0010133,3.35e-66,4;UBERON:0001894,1.80e-38,7;UBERON:0006222,1.80e-38,7;UBERON:0000473,1.35e-09,8;UBERON:0002368,1.14e-08,35;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41;UBERON:0003135,2.47e-07,11;UBERON:0000949,5.58e-07,45 | |||
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| ||
|short_description=p6@IGSF1 | |short_description=p6@IGSF1 | ||
}} | }} |
Latest revision as of 10:42, 19 September 2015
Short description: | p6@IGSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IGSF1_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 5bp_to_ENST00000370903, NM_001170961, NM_001170962, NM_001555, NM_205833_5end |
EntrezGene: | IGSF1 |
HGNC: | 5948 |
UniProt: | Q8N6C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.99e-11 | 7 |
germ cell | 8.99e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.99e-131 | 2 |
gland of diencephalon | 3.35e-66 | 4 |
neuroendocrine gland | 3.35e-66 | 4 |
diencephalon | 1.80e-38 | 7 |
future diencephalon | 1.80e-38 | 7 |
testis | 1.35e-09 | 8 |
endocrine gland | 1.14e-08 | 35 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |
male reproductive organ | 2.47e-07 | 11 |
endocrine system | 5.58e-07 | 45 |