FFCP PHASE1:Hg19::chr17:29297609..29297620,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:29297609..29297620,+
|short_description=p6@RNF135
|description=CAGE_peak_6_at_RNF135_5end
|association_with_transcript=-335bp_to_NM_001184992,NM_032322,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84282 | |EntrezGene=84282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21158 | |HGNC=21158 | ||
|TSSclassifier=strong | |||
|UniProt=F5GX60,B6ZLM5,Q8IUD6,B2R7G9 | |UniProt=F5GX60,B6ZLM5,Q8IUD6,B2R7G9 | ||
|association_with_transcript=-335bp_to_NM_001184992,NM_032322,NM_197939,uc002hfz.2,uc002hga.2,uc002hgb.2,uc010csm.2_5end | |||
|cluster_id=chr17:29297609..29297620,+ | |||
|description=CAGE_peak_6_at_RNF135_5end | |||
|id=chr17:29297609..29297620,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.23e-10!7;CL:0000586!3.23e-10!7;CL:0002393!1.18e-07!9;CL:0002397!1.18e-07!9;CL:0002194!2.32e-07!63;CL:0000576!2.32e-07!63;CL:0000040!2.32e-07!63;CL:0000559!2.32e-07!63;CL:0002009!5.46e-07!65;CL:0000839!5.65e-07!70;CL:0000557!6.96e-07!71;CL:0002619!7.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.81e-40;1!CL:0000557;1.81e-40;1!CL:0000307;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.83e-14,3;CL:0000069,1.83e-14,3;CL:0000307,1.83e-14,3;CL:0000377,1.83e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.81e-40;1!DOID:0070004;1.81e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,9.91e-41,1;DOID:0070004,9.91e-41,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0002371;3.36e-14;12!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0001474;8.11e-10;18!UBERON:0004765;4.28e-07;26!UBERON:0003126;5.86e-07;7!UBERON:0001894;5.86e-07;7!UBERON:0001005;5.86e-07;7!UBERON:0002405;7.24e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0.553995408531877,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0.637812899895131,0.419317291016752,0.22465726229299,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.530119073285941,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0,0,0.442317039724898,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0.83088067605837,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0.245772908753719,0,0,0,1.37771983728653,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29457701123761,0.126698501011437,0.815910637935854,0,0.18378979906969,0.50141507858475,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0.553995408531877,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0.637812899895131,0.419317291016752,0.22465726229299,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.530119073285941,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0,0,0.442317039724898,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0.83088067605837,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0.245772908753719,0,0,0,1.37771983728653,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29457701123761,0.126698501011437,0.815910637935854,0,0.18378979906969,0.50141507858475,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@RNF135 | |||
}} | }} |
Latest revision as of 10:43, 19 September 2015
Short description: | p6@RNF135 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RNF135_5end |
Coexpression cluster: | NA |
Association with transcript: | -335bp_to_NM_001184992, NM_032322, NM_197939, uc002hfz.2, uc002hga.2, uc002hgb.2, uc010csm.2_5end |
EntrezGene: | RNF135 |
HGNC: | 21158 |
UniProt: | F5GX60B6ZLM5Q8IUD6B2R7G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.83e-14 | 3 |
branched duct epithelial cell | 1.83e-14 | 3 |
tracheal epithelial cell | 1.83e-14 | 3 |
tracheoblast | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 9.91e-41 | 1 |
myeloma | 9.91e-41 | 1 |