Personal tools

FFCP PHASE1:Hg19::chr3:108015382..108015406,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=11148
|EntrezGene=11148
Line 8: Line 8:
|UniProt=C9JY43,C9JY13,B4DKN2,C9J8J7,C9J7D0
|UniProt=C9JY43,C9JY13,B4DKN2,C9J8J7,C9J7D0
|association_with_transcript=0bp_to_ENST00000462629,ENST00000463019,ENST00000467562,ENST00000482430,ENST00000491820,uc003dwy.3,uc010hpu.2,uc011bhl.1_5end
|association_with_transcript=0bp_to_ENST00000462629,ENST00000463019,ENST00000467562,ENST00000482430,ENST00000491820,uc003dwy.3,uc010hpu.2,uc011bhl.1_5end
|cluster_id=chr3:108015382..108015406,+
|coexpression_cluster_id=C25
|coexpression_cluster_id=C25
|description=CAGE_peak_1_at_HHLA2_5end
|description=CAGE_peak_1_at_HHLA2_5end

Latest revision as of 11:19, 19 September 2015

Short description:p1@HHLA2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_HHLA2_5end
Coexpression cluster:C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall
Association with transcript: 0bp_to_ENST00000462629, ENST00000463019, ENST00000467562, ENST00000482430, ENST00000491820, uc003dwy.3, uc010hpu.2, uc011bhl.1_5end
EntrezGene:HHLA2
HGNC: 4905
UniProt: C9JY43C9JY13B4DKN2C9J8J7C9J7D0
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
50
100
150
200
250




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data