FFCP PHASE1:Hg19::chr3:108015382..108015406,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=11148 | |EntrezGene=11148 | ||
Line 8: | Line 8: | ||
|UniProt=C9JY43,C9JY13,B4DKN2,C9J8J7,C9J7D0 | |UniProt=C9JY43,C9JY13,B4DKN2,C9J8J7,C9J7D0 | ||
|association_with_transcript=0bp_to_ENST00000462629,ENST00000463019,ENST00000467562,ENST00000482430,ENST00000491820,uc003dwy.3,uc010hpu.2,uc011bhl.1_5end | |association_with_transcript=0bp_to_ENST00000462629,ENST00000463019,ENST00000467562,ENST00000482430,ENST00000491820,uc003dwy.3,uc010hpu.2,uc011bhl.1_5end | ||
|cluster_id=chr3:108015382..108015406,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_HHLA2_5end | |description=CAGE_peak_1_at_HHLA2_5end |
Latest revision as of 11:19, 19 September 2015
Short description: | p1@HHLA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HHLA2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000462629, ENST00000463019, ENST00000467562, ENST00000482430, ENST00000491820, uc003dwy.3, uc010hpu.2, uc011bhl.1_5end |
EntrezGene: | HHLA2 |
HGNC: | 4905 |
UniProt: | C9JY43C9JY13B4DKN2C9J8J7C9J7D0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@HHLA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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intestine | 3.49e-35 | 17 |
gastrointestinal system | 1.08e-28 | 25 |
large intestine | 6.01e-21 | 11 |
small intestine | 5.87e-13 | 4 |
subdivision of digestive tract | 2.39e-12 | 118 |
colon | 4.45e-12 | 9 |
lower digestive tract | 4.82e-12 | 5 |
digestive system | 8.72e-11 | 145 |
digestive tract | 8.72e-11 | 145 |
primitive gut | 8.72e-11 | 145 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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anemia | 4.66e-08 | 1 |
non-Hodgkin lymphoma | 1.18e-07 | 1 |
cutaneous T cell lymphoma | 1.18e-07 | 1 |
mycosis fungoides | 1.18e-07 | 1 |
Showing 1 to 4 of 4 entries