FFCP PHASE1:Hg19::chr22:24990735..24990742,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2678,728441 | |EntrezGene=2678,728441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4250,4251 | |HGNC=4250,4251 | ||
|TSSclassifier=strong | |||
|UniProt=C9JGF3 | |UniProt=C9JGF3 | ||
|association_with_transcript=-35bp_to_ENST00000456869_5end | |association_with_transcript=-35bp_to_ENST00000456869_5end | ||
|cluster_id=chr22:24990735..24990742,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_8_at_GGT2_5end,CAGE_peak_9_at_GGT1_5end | |description=CAGE_peak_8_at_GGT2_5end,CAGE_peak_9_at_GGT1_5end | ||
|id=chr22:24990735..24990742,+ | |id=chr22:24990735..24990742,+ | ||
|ontology_enrichment_celltype=CL:0000313!1.07e-11!1 | |ontology_enrichment_celltype=CL:0000313!1.07e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0005754;3.34e-66;1!UBERON:0007297;5.96e-34;2!UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | |||
|ontology_enrichment_disease=DOID:2152!1.07e-11!1 | |ontology_enrichment_disease=DOID:2152!1.07e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.75e-32!3;UBERON:0004054!1.75e-32!3;UBERON:0005904!1.51e-24!4;UBERON:0000341!3.53e-22!2;UBERON:0004175!7.23e-15!25;UBERON:0005156!2.92e-13!59;UBERON:0000990!2.92e-13!59;UBERON:0003133!4.39e-13!48;UBERON:0000998!2.93e-12!1;UBERON:0006868!2.93e-12!1;UBERON:0001736!5.05e-12!1;UBERON:0006298!5.05e-12!1;UBERON:0001000!5.62e-12!1;UBERON:0005352!5.62e-12!1;UBERON:0001301!7.76e-12!1;UBERON:0006834!9.61e-12!1;UBERON:0004911!1.07e-11!1;UBERON:0007023!2.38e-11!115;UBERON:0003135!2.66e-09!11;UBERON:0002046!2.68e-09!5;UBERON:0004117!2.68e-09!5;UBERON:0007689!2.68e-09!5;UBERON:0007123!2.68e-09!5;UBERON:0003091!2.68e-09!5;UBERON:0003100!7.67e-09!41;UBERON:0002530!3.47e-08!59;UBERON:0001044!4.19e-08!6;UBERON:0003293!4.19e-08!6;UBERON:0003294!4.19e-08!6;UBERON:0010047!4.19e-08!6;UBERON:0000167!4.19e-08!6;UBERON:0003101!5.86e-08!22;UBERON:0000079!5.86e-08!22;UBERON:0003134!5.96e-07!37;UBERON:0000474!5.96e-07!37 | |ontology_enrichment_uberon=UBERON:0006947!1.75e-32!3;UBERON:0004054!1.75e-32!3;UBERON:0005904!1.51e-24!4;UBERON:0000341!3.53e-22!2;UBERON:0004175!7.23e-15!25;UBERON:0005156!2.92e-13!59;UBERON:0000990!2.92e-13!59;UBERON:0003133!4.39e-13!48;UBERON:0000998!2.93e-12!1;UBERON:0006868!2.93e-12!1;UBERON:0001736!5.05e-12!1;UBERON:0006298!5.05e-12!1;UBERON:0001000!5.62e-12!1;UBERON:0005352!5.62e-12!1;UBERON:0001301!7.76e-12!1;UBERON:0006834!9.61e-12!1;UBERON:0004911!1.07e-11!1;UBERON:0007023!2.38e-11!115;UBERON:0003135!2.66e-09!11;UBERON:0002046!2.68e-09!5;UBERON:0004117!2.68e-09!5;UBERON:0007689!2.68e-09!5;UBERON:0007123!2.68e-09!5;UBERON:0003091!2.68e-09!5;UBERON:0003100!7.67e-09!41;UBERON:0002530!3.47e-08!59;UBERON:0001044!4.19e-08!6;UBERON:0003293!4.19e-08!6;UBERON:0003294!4.19e-08!6;UBERON:0010047!4.19e-08!6;UBERON:0000167!4.19e-08!6;UBERON:0003101!5.86e-08!22;UBERON:0000079!5.86e-08!22;UBERON:0003134!5.96e-07!37;UBERON:0000474!5.96e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;3.34e-66;1!UBERON:0006868;3.34e-66;1!UBERON:0006947;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0001911;7.35e-18;4!UBERON:0005904;9.45e-18;4!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6!UBERON:0000473;1.41e-09;8!UBERON:0002365;2.73e-09;31!UBERON:0002330;2.73e-09;31!UBERON:0002530;7.69e-09;57!UBERON:0000310;5.73e-08;10!UBERON:0000058;6.34e-08;10!UBERON:0001443;2.32e-07;11!UBERON:0003135;2.55e-07;11!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.39e-66,1;UBERON:0006868,2.39e-66,1;UBERON:0006947,3.27e-23,3;UBERON:0004054,3.27e-23,3;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0005904,8.69e-18,4;UBERON:0001044,2.74e-12,6;UBERON:0003293,2.74e-12,6;UBERON:0003294,2.74e-12,6;UBERON:0010047,2.74e-12,6;UBERON:0000167,2.74e-12,6;UBERON:0002530,3.99e-11,59;UBERON:0002365,1.20e-09,31;UBERON:0002330,1.20e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0000473,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0000310,5.73e-08,10;UBERON:0003408,6.56e-08,10;UBERON:0001443,2.32e-07,11;UBERON:0003135,2.47e-07,11;UBERON:0004876,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p8@GGT2,p9@GGT1 | |short_description=p8@GGT2,p9@GGT1 | ||
}} | }} |
Latest revision as of 11:22, 19 September 2015
Short description: | p8@GGT2, p9@GGT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GGT2_5end, CAGE_peak_9_at_GGT1_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -35bp_to_ENST00000456869_5end |
EntrezGene: | 2678,728441 |
HGNC: | 4251&submit=Submit 4250, 4251 |
UniProt: | C9JGF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.39e-66 | 1 |
seminal fluid secreting gland | 2.39e-66 | 1 |
male genital duct | 3.27e-23 | 3 |
internal male genitalia | 3.27e-23 | 3 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
duct of male reproductive system | 8.69e-18 | 4 |
saliva-secreting gland | 2.74e-12 | 6 |
gland of oral region | 2.74e-12 | 6 |
gland of foregut | 2.74e-12 | 6 |
oral gland | 2.74e-12 | 6 |
oral cavity | 2.74e-12 | 6 |
gland | 3.99e-11 | 59 |
exocrine gland | 1.20e-09 | 31 |
exocrine system | 1.20e-09 | 31 |
external ectoderm | 1.24e-09 | 8 |
testis | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
breast | 5.73e-08 | 10 |
gland of gut | 6.56e-08 | 10 |
chest | 2.32e-07 | 11 |
male reproductive organ | 2.47e-07 | 11 |
urogenital ridge | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |