FFCP PHASE1:Hg19::chr22:24990746..24990764,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2678,728441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4250,4251 | |||
|TSSclassifier=strong | |||
|UniProt=C9JGF3 | |||
|association_with_transcript=-13bp_to_ENST00000456869_5end | |||
|cluster_id=chr22:24990746..24990764,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_5_at_GGT1_5end,CAGE_peak_5_at_GGT2_5end | |||
|id=chr22:24990746..24990764,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.13e-50;2!UBERON:0005754;2.16e-26;1!UBERON:0008425;2.78e-26;1!UBERON:0008801;1.26e-25;1!UBERON:0009847;1.67e-09;3!UBERON:0003353;1.67e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.40e-07;4!DOID:1612;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.40e-07,4;DOID:1612,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0006947!2.31e-16!3;UBERON:0004054!2.31e-16!3;UBERON:0007023!1.55e-13!115;UBERON:0005904!2.17e-12!4;UBERON:0001829!3.01e-11!2;UBERON:0003127!1.95e-10!2;UBERON:0000341!2.47e-10!2;UBERON:0004175!8.80e-09!25;UBERON:0001044!3.01e-08!6;UBERON:0003293!3.01e-08!6;UBERON:0003294!3.01e-08!6;UBERON:0010047!3.01e-08!6;UBERON:0000167!3.01e-08!6;UBERON:0003135!1.41e-07!11;UBERON:0000078!8.48e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.14e-74;3!UBERON:0004054;1.14e-74;3!UBERON:0005904;2.86e-56;4!UBERON:0000998;2.16e-26;1!UBERON:0006868;2.16e-26;1!UBERON:0001000;3.58e-26;1!UBERON:0005352;3.58e-26;1!UBERON:0001301;6.72e-26;1!UBERON:0001831;1.26e-25;1!UBERON:0001567;1.26e-25;1!UBERON:0000058;4.58e-23;10!UBERON:0003135;4.81e-21;11!UBERON:0003101;1.78e-18;22!UBERON:0000079;1.78e-18;22!UBERON:0001044;2.48e-17;6!UBERON:0003293;2.48e-17;6!UBERON:0003294;2.48e-17;6!UBERON:0010047;2.48e-17;6!UBERON:0003408;2.48e-17;6!UBERON:0000167;2.48e-17;6!UBERON:0001829;1.55e-13;2!UBERON:0004089;1.55e-13;2!UBERON:0004175;2.22e-11;21!UBERON:0002530;2.89e-10;57!UBERON:0003937;2.89e-09;12!UBERON:0005399;2.89e-09;12!UBERON:0001041;5.46e-08;14!UBERON:0002365;1.05e-07;31!UBERON:0002330;1.05e-07;31!UBERON:0001911;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.01e-74,3;UBERON:0004054,1.01e-74,3;UBERON:0005904,2.60e-56,4;UBERON:0000998,2.16e-26,1;UBERON:0006868,2.16e-26,1;UBERON:0001000,3.58e-26,1;UBERON:0005352,3.58e-26,1;UBERON:0001301,5.93e-26,1;UBERON:0001831,1.26e-25,1;UBERON:0001567,1.26e-25,1;UBERON:0008801,1.26e-25,1;UBERON:0003135,4.65e-21,11;UBERON:0003101,1.74e-18,22;UBERON:0000079,1.74e-18,22;UBERON:0001044,2.58e-17,6;UBERON:0003293,2.58e-17,6;UBERON:0003294,2.58e-17,6;UBERON:0010047,2.58e-17,6;UBERON:0000167,2.58e-17,6;UBERON:0002530,3.25e-15,59;UBERON:0001829,1.55e-13,2;UBERON:0004089,1.55e-13,2;UBERON:0000058,1.64e-12,19;UBERON:0000080,4.42e-12,9;UBERON:0002120,4.42e-12,9;UBERON:0004875,4.42e-12,9;UBERON:0005721,4.42e-12,9;UBERON:0005754,4.42e-12,9;UBERON:0007297,4.42e-12,9;UBERON:0003408,8.47e-11,10;UBERON:0004876,4.62e-10,11;UBERON:0004175,1.13e-09,25;UBERON:0003887,2.66e-09,12;UBERON:0003937,2.89e-09,12;UBERON:0005399,2.89e-09,12;UBERON:0003064,1.17e-08,28;UBERON:0007023,6.74e-08,114;UBERON:0002365,7.53e-08,31;UBERON:0002330,7.53e-08,31;UBERON:0001911,1.40e-07,4;UBERON:0005333,1.40e-07,4;UBERON:0008425,1.40e-07,4;UBERON:0005311,1.40e-07,4;UBERON:0005156,3.68e-07,59;UBERON:0000990,3.68e-07,59;UBERON:0002553,6.57e-07,61;UBERON:0000161,8.49e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,13.5562999994103,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,11.8375320854817,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0.347119476670262,0,0,4.89234671077684,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98273752831953,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73250094702305,0,0,24.5564489110739,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0,0,0,0.700118741059814,5.86139847978836,0,0.684466602170562,0.5388164241167,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p5@GGT1,p5@GGT2 | |||
}} |
Latest revision as of 11:24, 19 September 2015
Short description: | p5@GGT1, p5@GGT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GGT1_5end, CAGE_peak_5_at_GGT2_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -13bp_to_ENST00000456869_5end |
EntrezGene: | 2678,728441 |
HGNC: | 4251&submit=Submit 4250, 4251 |
UniProt: | C9JGF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.40e-07 | 4 |
breast cancer | 1.40e-07 | 4 |