FFCP PHASE1:Hg19::chr11:65629516..65629528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1072 | |EntrezGene=1072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1874 | |HGNC=1874 | ||
|TSSclassifier=strong | |||
|UniProt=E9PP50 | |UniProt=E9PP50 | ||
|association_with_transcript=-19bp_to_ENST00000532134_5end | |association_with_transcript=-19bp_to_ENST00000532134_5end | ||
|cluster_id=chr11:65629516..65629528,- | |||
|coexpression_cluster_id=C161 | |coexpression_cluster_id=C161 | ||
|description=CAGE_peak_29_at_CFL1_5end | |description=CAGE_peak_29_at_CFL1_5end | ||
|id=chr11:65629516..65629528,- | |id=chr11:65629516..65629528,- | ||
|ontology_enrichment_celltype=CL:0000066!7.21e-13!254 | |ontology_enrichment_celltype=CL:0000066!7.21e-13!254 | ||
|ontology_enrichment_celltype_v019=CL:0002097;3.61e-34;2!CL:0000174;2.62e-23;3!CL:0000312;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000138;2.59e-12;6!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9!CL:0000153;1.16e-08;9!CL:0000447;1.16e-08;9!CL:0000362;1.16e-08;9!CL:0000151;5.50e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.61e-34,2;CL:0000174,2.62e-23,3;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000058,2.74e-12,6;CL:0000138,2.74e-12,6;CL:0000150,1.04e-08,9;CL:0000163,1.04e-08,9;CL:0000362,1.12e-08,9;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease=DOID:162!3.33e-08!235;DOID:14566!8.36e-08!239;DOID:0050687!2.20e-07!143 | |ontology_enrichment_disease=DOID:162!3.33e-08!235;DOID:14566!8.36e-08!239;DOID:0050687!2.20e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3371;3.34e-66;1!DOID:4549;3.34e-66;1!DOID:5861;3.34e-66;1!DOID:6496;3.34e-66;1!DOID:170;2.19e-12;6!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.66e-66,1;DOID:4549,4.66e-66,1;DOID:5861,4.66e-66,1;DOID:6496,4.66e-66,1;DOID:170,2.19e-12,6;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.62e-23;3!UBERON:0001235;2.62e-23;3!UBERON:0006858;2.62e-23;3!UBERON:0002418;3.66e-23;3!UBERON:0004755;3.66e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.62e-23,3;UBERON:0001235,2.62e-23,3;UBERON:0006858,2.62e-23,3;UBERON:0002418,4.09e-23,3;UBERON:0004755,4.09e-23,3 | |||
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| ||
|short_description=p29@CFL1 | |short_description=p29@CFL1 | ||
}} | }} |
Latest revision as of 11:40, 19 September 2015
Short description: | p29@CFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_CFL1_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | -19bp_to_ENST00000532134_5end |
EntrezGene: | CFL1 |
HGNC: | 1874 |
UniProt: | E9PP50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.61e-34 | 2 |
steroid hormone secreting cell | 2.62e-23 | 3 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
chondroblast | 2.74e-12 | 6 |
chondrocyte | 2.74e-12 | 6 |
glandular epithelial cell | 1.04e-08 | 9 |
endocrine cell | 1.04e-08 | 9 |
epidermal cell | 1.12e-08 | 9 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.62e-23 | 3 |
adrenal cortex | 2.62e-23 | 3 |
adrenal/interrenal gland | 2.62e-23 | 3 |
cartilage tissue | 4.09e-23 | 3 |
skeletal tissue | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.66e-66 | 1 |
extraosseous chondrosarcoma | 4.66e-66 | 1 |
myxoid chondrosarcoma | 4.66e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 4.66e-66 | 1 |
endocrine gland cancer | 2.19e-12 | 6 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |