FFCP PHASE1:Hg19::chr1:8483723..8483752,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:8483723..8483752,- to FFCP PHASE1:Hg19::chr1:8483723..8483752,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2R6 | |UniProt=Q9P2R6 | ||
|association_with_transcript=0bp_to_ENST00000476556,ENST00000492766,NM_001042682,uc001apd.2_5end | |||
|cluster_id=chr1:8483723..8483752,- | |||
|description=CAGE_peak_12_at_RERE_5end | |||
|id=chr1:8483723..8483752,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.75e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-39!115;UBERON:0001049!3.41e-22!57;UBERON:0005068!3.41e-22!57;UBERON:0006241!3.41e-22!57;UBERON:0007135!3.41e-22!57;UBERON:0002616!2.27e-20!59;UBERON:0003075!2.35e-19!86;UBERON:0007284!2.35e-19!86;UBERON:0002346!4.80e-19!90;UBERON:0001017!6.66e-19!82;UBERON:0005743!8.00e-19!86;UBERON:0000955!3.00e-18!69;UBERON:0006238!3.00e-18!69;UBERON:0003080!3.69e-17!42;UBERON:0000073!6.68e-17!94;UBERON:0001016!6.68e-17!94;UBERON:0002780!7.78e-17!41;UBERON:0001890!7.78e-17!41;UBERON:0006240!7.78e-17!41;UBERON:0001893!1.11e-14!34;UBERON:0002020!3.61e-14!34;UBERON:0003528!3.61e-14!34;UBERON:0001869!4.37e-14!32;UBERON:0002791!4.52e-14!33;UBERON:0003056!2.70e-13!61;UBERON:0000956!7.23e-12!25;UBERON:0000203!7.23e-12!25;UBERON:0002619!5.97e-11!22;UBERON:0000033!2.66e-10!123;UBERON:0000153!3.82e-10!129;UBERON:0007811!3.82e-10!129;UBERON:0000924!4.39e-10!173;UBERON:0006601!4.39e-10!173;UBERON:0004121!5.00e-10!169;UBERON:0001950!5.09e-10!20;UBERON:0000062!1.53e-09!511;UBERON:0000468!3.25e-08!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.63e-17;34!UBERON:0001869;4.96e-17;32!UBERON:0002791;1.58e-16;32!UBERON:0003528;1.99e-16;34!UBERON:0002020;1.99e-16;34!UBERON:0002780;7.28e-16;41!UBERON:0001890;7.28e-16;41!UBERON:0000073;1.17e-15;53!UBERON:0002616;1.17e-15;53!UBERON:0000956;2.02e-15;25!UBERON:0000203;2.02e-15;25!UBERON:0002619;4.15e-14;22!UBERON:0001950;8.14e-13;20!UBERON:0007023;8.88e-12;114!UBERON:0001017;5.09e-11;75!UBERON:0000955;7.33e-11;68!UBERON:0001016;1.15e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-49,114;UBERON:0001049,1.93e-28,56;UBERON:0005068,1.93e-28,56;UBERON:0006241,1.93e-28,56;UBERON:0007135,1.93e-28,56;UBERON:0000073,4.57e-27,53;UBERON:0002616,4.57e-27,53;UBERON:0001017,9.23e-25,81;UBERON:0003075,1.13e-23,82;UBERON:0007284,1.13e-23,82;UBERON:0002346,2.94e-23,86;UBERON:0000955,1.90e-22,68;UBERON:0006238,1.90e-22,68;UBERON:0002780,3.87e-22,41;UBERON:0001890,3.87e-22,41;UBERON:0003080,3.87e-22,41;UBERON:0006240,3.87e-22,41;UBERON:0001016,1.34e-21,89;UBERON:0001893,9.33e-20,34;UBERON:0003528,4.76e-19,34;UBERON:0002020,4.76e-19,34;UBERON:0001869,6.10e-19,32;UBERON:0002791,1.97e-18,32;UBERON:0010314,9.26e-18,132;UBERON:0003056,1.61e-17,61;UBERON:0010371,6.49e-17,104;UBERON:0000956,2.44e-15,25;UBERON:0000203,2.44e-15,25;UBERON:0002619,4.41e-14,22;UBERON:0004121,7.65e-13,171;UBERON:0000924,7.65e-13,171;UBERON:0006601,7.65e-13,171;UBERON:0001950,8.20e-13,20;UBERON:0011216,5.73e-11,223;UBERON:0003076,1.70e-07,15;UBERON:0003057,1.70e-07,15;UBERON:0000923,1.89e-07,560;UBERON:0010316,1.89e-07,560;UBERON:0005291,1.89e-07,560;UBERON:0006598,1.89e-07,560;UBERON:0010317,1.89e-07,560;UBERON:0002532,1.89e-07,560;UBERON:0002050,4.86e-07,564;UBERON:0004732,9.00e-07,13 | |||
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| ||
|short_description=p12@RERE | |||
}} | }} |
Latest revision as of 11:46, 19 September 2015
Short description: | p12@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476556, ENST00000492766, NM_001042682, uc001apd.2_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | Q9P2R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data