FFCP PHASE1:Hg19::chr14:24042158..24042170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84502 | |EntrezGene=84502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20156 | |HGNC=20156 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z967 | |UniProt=B7Z967 | ||
|association_with_transcript=39bp_to_AK304514_5end | |association_with_transcript=39bp_to_AK304514_5end | ||
|cluster_id=chr14:24042158..24042170,- | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_18_at_JPH4_5end | |description=CAGE_peak_18_at_JPH4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!1.24e-23!5;CL:0000457!1.24e-23!5;CL:0002191!1.24e-23!5;CL:0000097!1.24e-23!5;CL:0000831!1.24e-23!5;CL:0002028!1.24e-23!5;CL:0002619!4.70e-14!3;CL:0000163!5.47e-13!9;CL:0000839!1.31e-12!70;CL:0000557!2.21e-12!71;CL:0000766!2.44e-11!76;CL:0000763!7.40e-10!112;CL:0000049!7.40e-10!112 | |ontology_enrichment_celltype=CL:0002274!1.24e-23!5;CL:0000457!1.24e-23!5;CL:0002191!1.24e-23!5;CL:0000097!1.24e-23!5;CL:0000831!1.24e-23!5;CL:0002028!1.24e-23!5;CL:0002619!4.70e-14!3;CL:0000163!5.47e-13!9;CL:0000839!1.31e-12!70;CL:0000557!2.21e-12!71;CL:0000766!2.44e-11!76;CL:0000763!7.40e-10!112;CL:0000049!7.40e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.45e-195;5!CL:0000163;4.60e-109;9!CL:0000151;1.62e-25;36!CL:0000766;2.38e-09;69 | |ontology_enrichment_celltype_v019=CL:0000097;2.45e-195;5!CL:0000163;4.60e-109;9!CL:0000151;1.62e-25;36!CL:0000766;2.38e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.45e-195,5;CL:0002028,2.45e-195,5;CL:0000163,4.60e-109,9;CL:0000151,5.37e-28,36;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-15!115;UBERON:0002308!1.53e-11!9;UBERON:0000125!1.53e-11!9;UBERON:0002371!1.34e-10!80;UBERON:0002390!5.94e-10!102;UBERON:0003061!5.94e-10!102;UBERON:0009663!7.69e-10!7;UBERON:0001474!1.28e-09!86;UBERON:0002193!1.03e-08!112;UBERON:0002298!1.04e-08!8;UBERON:0002405!2.60e-08!115;UBERON:0002020!3.64e-08!34;UBERON:0003528!3.64e-08!34;UBERON:0004765!1.10e-07!101;UBERON:0001434!1.10e-07!101;UBERON:0002420!1.14e-07!9;UBERON:0007245!1.14e-07!9;UBERON:0010009!1.14e-07!9;UBERON:0010011!1.14e-07!9;UBERON:0000454!1.14e-07!9;UBERON:0006331!9.83e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.37e-15!115;UBERON:0002308!1.53e-11!9;UBERON:0000125!1.53e-11!9;UBERON:0002371!1.34e-10!80;UBERON:0002390!5.94e-10!102;UBERON:0003061!5.94e-10!102;UBERON:0009663!7.69e-10!7;UBERON:0001474!1.28e-09!86;UBERON:0002193!1.03e-08!112;UBERON:0002298!1.04e-08!8;UBERON:0002405!2.60e-08!115;UBERON:0002020!3.64e-08!34;UBERON:0003528!3.64e-08!34;UBERON:0004765!1.10e-07!101;UBERON:0001434!1.10e-07!101;UBERON:0002420!1.14e-07!9;UBERON:0007245!1.14e-07!9;UBERON:0010009!1.14e-07!9;UBERON:0010011!1.14e-07!9;UBERON:0000454!1.14e-07!9;UBERON:0006331!9.83e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
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| ||
|short_description=p18@JPH4 | |short_description=p18@JPH4 | ||
}} | }} |
Latest revision as of 12:14, 19 September 2015
Short description: | p18@JPH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_JPH4_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 39bp_to_AK304514_5end |
EntrezGene: | JPH4 |
HGNC: | 20156 |
UniProt: | B7Z967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.45e-195 | 5 |
basophil mast progenitor cell | 2.45e-195 | 5 |
endocrine cell | 4.60e-109 | 9 |
secretory cell | 5.37e-28 | 36 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |