FFCP PHASE2:Hg19::chr17:30813708..30813721,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8851 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1775 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1775 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q15078 | ||
|association_with_transcript=71bp_to_ENST00000313401_5end | |association_with_transcript=71bp_to_ENST00000313401_5end | ||
|cluster_id=chr17:30813708..30813721,+ | |cluster_id=chr17:30813708..30813721,+ |
Latest revision as of 12:26, 19 September 2015
Short description: | p8@CDK5R1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDK5R1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 71bp_to_ENST00000313401_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | Q15078 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@CDK5R1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 1.06e-13 | 8 |
neuron | 2.61e-07 | 6 |
neuroblast | 2.61e-07 | 6 |
electrically signaling cell | 2.61e-07 | 6 |
neural cell | 7.90e-07 | 25 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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cerebral hemisphere | 2.53e-56 | 32 |
regional part of cerebral cortex | 3.48e-55 | 22 |
neocortex | 2.20e-54 | 20 |
central nervous system | 2.64e-54 | 81 |
telencephalon | 8.63e-53 | 34 |
nervous system | 2.80e-51 | 89 |
regional part of telencephalon | 4.54e-51 | 32 |
cerebral cortex | 2.65e-48 | 25 |
pallium | 2.65e-48 | 25 |
brain grey matter | 7.51e-48 | 34 |
Showing 1 to 10 of 52 entries