FFCP PHASE1:Hg19::chr3:111261025..111261070,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10225 | |EntrezGene=10225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16892 | |HGNC=16892 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDV3,E9PEJ1 | |UniProt=F8WDV3,E9PEJ1 | ||
|association_with_transcript=0bp_to_ENST00000488054,ENST00000494798_5end | |association_with_transcript=0bp_to_ENST00000488054,ENST00000494798_5end | ||
|cluster_id=chr3:111261025..111261070,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_CD96_5end | |description=CAGE_peak_1_at_CD96_5end |
Latest revision as of 12:33, 19 September 2015
Short description: | p1@CD96 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD96_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000488054, ENST00000494798_5end |
EntrezGene: | CD96 |
HGNC: | 16892 |
UniProt: | F8WDV3E9PEJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@CD96 |
---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.12e-41 | 177 |
hematopoietic stem cell | 6.39e-41 | 168 |
leukocyte | 5.50e-40 | 136 |
hematopoietic oligopotent progenitor cell | 2.34e-37 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-37 | 161 |
nongranular leukocyte | 2.23e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.31e-27 | 120 |
T cell | 4.37e-27 | 25 |
pro-T cell | 4.37e-27 | 25 |
mature alpha-beta T cell | 3.18e-25 | 18 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.92e-20 | 98 |
blood island | 1.92e-20 | 98 |
hemolymphoid system | 3.90e-19 | 108 |
blood | 1.54e-18 | 15 |
haemolymphatic fluid | 1.54e-18 | 15 |
organism substance | 1.54e-18 | 15 |
immune system | 3.21e-09 | 93 |
hemopoietic organ | 4.26e-07 | 7 |
immune organ | 4.26e-07 | 7 |
connective tissue | 7.65e-07 | 371 |
Showing 1 to 10 of 10 entries