FFCP PHASE1:Hg19::chr2:202316260..202316308,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13206 | |||
|TSSclassifier=strong | |||
|UniProt=O60296 | |||
|association_with_transcript=0bp_to_ENST00000332624_5end | |||
|cluster_id=chr2:202316260..202316308,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_TRAK2_5end | |||
|id=chr2:202316260..202316308,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-30!115;UBERON:0001049!1.01e-11!57;UBERON:0005068!1.01e-11!57;UBERON:0006241!1.01e-11!57;UBERON:0007135!1.01e-11!57;UBERON:0002616!1.71e-11!59;UBERON:0000955!4.91e-11!69;UBERON:0006238!4.91e-11!69;UBERON:0001017!4.45e-10!82;UBERON:0005743!1.16e-09!86;UBERON:0002346!1.96e-09!90;UBERON:0003075!2.42e-09!86;UBERON:0007284!2.42e-09!86;UBERON:0003080!1.05e-08!42;UBERON:0001009!2.79e-08!113;UBERON:0002780!2.93e-08!41;UBERON:0001890!2.93e-08!41;UBERON:0006240!2.93e-08!41;UBERON:0000073!7.11e-08!94;UBERON:0001016!7.11e-08!94;UBERON:0000153!1.78e-07!129;UBERON:0007811!1.78e-07!129;UBERON:0000033!2.26e-07!123;UBERON:0004535!2.67e-07!110;UBERON:0001893!7.28e-07!34;UBERON:0002020!7.81e-07!34;UBERON:0003528!7.81e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.28e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.71e-30,114;UBERON:0010314,2.01e-11,132;UBERON:0001049,2.89e-11,56;UBERON:0005068,2.89e-11,56;UBERON:0006241,2.89e-11,56;UBERON:0007135,2.89e-11,56;UBERON:0000955,1.30e-10,68;UBERON:0006238,1.30e-10,68;UBERON:0000073,4.58e-10,53;UBERON:0002616,4.58e-10,53;UBERON:0002346,4.94e-10,86;UBERON:0003075,5.86e-10,82;UBERON:0007284,5.86e-10,82;UBERON:0001017,1.04e-09,81;UBERON:0002780,2.93e-08,41;UBERON:0001890,2.93e-08,41;UBERON:0003080,2.93e-08,41;UBERON:0006240,2.93e-08,41;UBERON:0001009,3.49e-08,112;UBERON:0001016,7.49e-08,89;UBERON:0004535,3.32e-07,109;UBERON:0001893,7.27e-07,34;UBERON:0003528,7.80e-07,34;UBERON:0002020,7.80e-07,34 | |||
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| |||
|short_description=p2@TRAK2 | |||
}} |
Latest revision as of 13:18, 19 September 2015
Short description: | p2@TRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAK2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000332624_5end |
EntrezGene: | TRAK2 |
HGNC: | 13206 |
UniProt: | O60296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.71e-30 | 114 |
structure with developmental contribution from neural crest | 2.01e-11 | 132 |
neural tube | 2.89e-11 | 56 |
neural rod | 2.89e-11 | 56 |
future spinal cord | 2.89e-11 | 56 |
neural keel | 2.89e-11 | 56 |
brain | 1.30e-10 | 68 |
future brain | 1.30e-10 | 68 |
regional part of nervous system | 4.58e-10 | 53 |
regional part of brain | 4.58e-10 | 53 |
neurectoderm | 4.94e-10 | 86 |
neural plate | 5.86e-10 | 82 |
presumptive neural plate | 5.86e-10 | 82 |
central nervous system | 1.04e-09 | 81 |
regional part of forebrain | 2.93e-08 | 41 |
forebrain | 2.93e-08 | 41 |
anterior neural tube | 2.93e-08 | 41 |
future forebrain | 2.93e-08 | 41 |
circulatory system | 3.49e-08 | 112 |
nervous system | 7.49e-08 | 89 |
cardiovascular system | 3.32e-07 | 109 |
telencephalon | 7.27e-07 | 34 |
brain grey matter | 7.80e-07 | 34 |
gray matter | 7.80e-07 | 34 |