FFCP PHASE1:Hg19::chr3:112051414..112051424,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4345 | |EntrezGene=4345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7203 | |HGNC=7203 | ||
|TSSclassifier=strong | |||
|UniProt=F8WC99 | |UniProt=F8WC99 | ||
|association_with_transcript=-490bp_to_ENST00000498096_5end | |association_with_transcript=-490bp_to_ENST00000498096_5end | ||
|cluster_id=chr3:112051414..112051424,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_3_at_CD200_5end | |description=CAGE_peak_3_at_CD200_5end | ||
|id=chr3:112051414..112051424,+ | |id=chr3:112051414..112051424,+ | ||
|ontology_enrichment_celltype=CL:0000077!3.77e-08!19 | |ontology_enrichment_celltype=CL:0000077!3.77e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.78e-15;2!CL:0000174;8.99e-11;3!CL:0002541;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.78e-15,2;CL:0000174,8.99e-11,3;CL:0002541,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!6.61e-32!34;UBERON:0002791!7.55e-30!33;UBERON:0002780!2.88e-28!41;UBERON:0001890!2.88e-28!41;UBERON:0006240!2.88e-28!41;UBERON:0001869!3.68e-28!32;UBERON:0003080!1.85e-27!42;UBERON:0002020!3.95e-26!34;UBERON:0003528!3.95e-26!34;UBERON:0001049!1.37e-24!57;UBERON:0005068!1.37e-24!57;UBERON:0006241!1.37e-24!57;UBERON:0007135!1.37e-24!57;UBERON:0002619!6.94e-24!22;UBERON:0002616!1.57e-23!59;UBERON:0001950!5.36e-23!20;UBERON:0000956!1.14e-20!25;UBERON:0000203!1.14e-20!25;UBERON:0000955!1.22e-20!69;UBERON:0006238!1.22e-20!69;UBERON:0005743!9.63e-20!86;UBERON:0001017!2.07e-19!82;UBERON:0007023!2.28e-19!115;UBERON:0003056!6.68e-19!61;UBERON:0003075!1.48e-18!86;UBERON:0007284!1.48e-18!86;UBERON:0002346!2.13e-17!90;UBERON:0000073!3.65e-17!94;UBERON:0001016!3.65e-17!94;UBERON:0000200!6.51e-12!6;UBERON:0000153!1.23e-10!129;UBERON:0007811!1.23e-10!129;UBERON:0000033!1.35e-10!123;UBERON:0002420!7.13e-10!9;UBERON:0007245!7.13e-10!9;UBERON:0010009!7.13e-10!9;UBERON:0010011!7.13e-10!9;UBERON:0000454!7.13e-10!9;UBERON:0002771!8.16e-10!3;UBERON:0009663!5.28e-09!7;UBERON:0001871!6.62e-09!7;UBERON:0001872!8.06e-09!5;UBERON:0004121!7.12e-08!169;UBERON:0000924!1.58e-07!173;UBERON:0006601!1.58e-07!173;UBERON:0002308!6.27e-07!9;UBERON:0000125!6.27e-07!9 | |ontology_enrichment_uberon=UBERON:0001893!6.61e-32!34;UBERON:0002791!7.55e-30!33;UBERON:0002780!2.88e-28!41;UBERON:0001890!2.88e-28!41;UBERON:0006240!2.88e-28!41;UBERON:0001869!3.68e-28!32;UBERON:0003080!1.85e-27!42;UBERON:0002020!3.95e-26!34;UBERON:0003528!3.95e-26!34;UBERON:0001049!1.37e-24!57;UBERON:0005068!1.37e-24!57;UBERON:0006241!1.37e-24!57;UBERON:0007135!1.37e-24!57;UBERON:0002619!6.94e-24!22;UBERON:0002616!1.57e-23!59;UBERON:0001950!5.36e-23!20;UBERON:0000956!1.14e-20!25;UBERON:0000203!1.14e-20!25;UBERON:0000955!1.22e-20!69;UBERON:0006238!1.22e-20!69;UBERON:0005743!9.63e-20!86;UBERON:0001017!2.07e-19!82;UBERON:0007023!2.28e-19!115;UBERON:0003056!6.68e-19!61;UBERON:0003075!1.48e-18!86;UBERON:0007284!1.48e-18!86;UBERON:0002346!2.13e-17!90;UBERON:0000073!3.65e-17!94;UBERON:0001016!3.65e-17!94;UBERON:0000200!6.51e-12!6;UBERON:0000153!1.23e-10!129;UBERON:0007811!1.23e-10!129;UBERON:0000033!1.35e-10!123;UBERON:0002420!7.13e-10!9;UBERON:0007245!7.13e-10!9;UBERON:0010009!7.13e-10!9;UBERON:0010011!7.13e-10!9;UBERON:0000454!7.13e-10!9;UBERON:0002771!8.16e-10!3;UBERON:0009663!5.28e-09!7;UBERON:0001871!6.62e-09!7;UBERON:0001872!8.06e-09!5;UBERON:0004121!7.12e-08!169;UBERON:0000924!1.58e-07!173;UBERON:0006601!1.58e-07!173;UBERON:0002308!6.27e-07!9;UBERON:0000125!6.27e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;8.99e-11;3!UBERON:0001235;8.99e-11;3!UBERON:0006858;8.99e-11;3!UBERON:0003124;1.09e-10;3!UBERON:0000920;1.09e-10;3!UBERON:0001987;1.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.71e-17,7;UBERON:0002369,8.99e-11,3;UBERON:0001235,8.99e-11,3;UBERON:0006858,8.99e-11,3;UBERON:0000920,1.20e-10,3;UBERON:0005631,4.38e-09,14;UBERON:0000158,4.38e-09,14;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73988653579522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,1.90012867315194,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.442317039724898,0,0.438770794307945,0,0,0,0,0,0,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.668245123238271,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0.976210119215705,0.500763722825999,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,2.14441591374926,0.260994291965212,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.38582807654183,0.506827321959218,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,8.87023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.218531143927391,0,0.203977659483963,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73988653579522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,1.90012867315194,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.442317039724898,0,0.438770794307945,0,0,0,0,0,0,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.668245123238271,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0.976210119215705,0.500763722825999,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,2.14441591374926,0.260994291965212,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.38582807654183,0.506827321959218,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,8.87023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.218531143927391,0,0.203977659483963,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CD200 | |short_description=p3@CD200 | ||
}} | }} |
Latest revision as of 13:28, 19 September 2015
Short description: | p3@CD200 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD200_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -490bp_to_ENST00000498096_5end |
EntrezGene: | CD200 |
HGNC: | 7203 |
UniProt: | F8WC99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.78e-15 | 2 |
steroid hormone secreting cell | 8.99e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.71e-17 | 7 |
adrenal gland | 8.99e-11 | 3 |
adrenal cortex | 8.99e-11 | 3 |
adrenal/interrenal gland | 8.99e-11 | 3 |
egg chorion | 1.20e-10 | 3 |
extraembryonic membrane | 4.38e-09 | 14 |
membranous layer | 4.38e-09 | 14 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |