FFCP PHASE1:Hg19::chr5:10307849..10307873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134147 | |EntrezGene=134147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25090 | |HGNC=25090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=77bp_to_ENST00000514202_5end | |association_with_transcript=77bp_to_ENST00000514202_5end | ||
|cluster_id=chr5:10307849..10307873,- | |||
|coexpression_cluster_id=C4444 | |coexpression_cluster_id=C4444 | ||
|description=CAGE_peak_3_at_CMBL_5end | |description=CAGE_peak_3_at_CMBL_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.86e-14!347;UBERON:0000475!1.39e-12!365;UBERON:0004921!1.93e-08!129;UBERON:0004185!1.93e-08!129;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0003104!4.39e-08!238;UBERON:0009142!4.39e-08!238;UBERON:0002100!7.73e-08!216;UBERON:0000468!7.82e-07!659 | |ontology_enrichment_uberon=UBERON:0000481!3.86e-14!347;UBERON:0000475!1.39e-12!365;UBERON:0004921!1.93e-08!129;UBERON:0004185!1.93e-08!129;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0003104!4.39e-08!238;UBERON:0009142!4.39e-08!238;UBERON:0002100!7.73e-08!216;UBERON:0000468!7.82e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.22e-10;9!UBERON:0001557;7.22e-10;9!UBERON:0011135;3.13e-07;5!UBERON:0002216;3.13e-07;5!UBERON:0011134;3.13e-07;5!UBERON:0002209;3.13e-07;5!UBERON:0002213;3.13e-07;5!UBERON:0007844;3.13e-07;5!UBERON:0011138;3.13e-07;5!UBERON:0001130;3.13e-07;5!UBERON:0001066;3.13e-07;5!UBERON:0001468;3.13e-07;5!UBERON:0003101;8.80e-07;22!UBERON:0000079;8.80e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001737;7.22e-10;9!UBERON:0001557;7.22e-10;9!UBERON:0011135;3.13e-07;5!UBERON:0002216;3.13e-07;5!UBERON:0011134;3.13e-07;5!UBERON:0002209;3.13e-07;5!UBERON:0002213;3.13e-07;5!UBERON:0007844;3.13e-07;5!UBERON:0011138;3.13e-07;5!UBERON:0001130;3.13e-07;5!UBERON:0001066;3.13e-07;5!UBERON:0001468;3.13e-07;5!UBERON:0003101;8.80e-07;22!UBERON:0000079;8.80e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.75e-10,9;UBERON:0004921,1.68e-07,118;UBERON:0003104,1.89e-07,160;UBERON:0009142,1.89e-07,160;UBERON:0011135,3.31e-07,5;UBERON:0002216,3.31e-07,5;UBERON:0011134,3.31e-07,5;UBERON:0002209,3.31e-07,5;UBERON:0002213,3.31e-07,5;UBERON:0005856,3.31e-07,5;UBERON:0005866,3.31e-07,5;UBERON:0005863,3.31e-07,5;UBERON:0007844,3.31e-07,5;UBERON:0011138,3.31e-07,5;UBERON:0001130,3.31e-07,5;UBERON:0001066,3.31e-07,5;UBERON:0001468,3.31e-07,5;UBERON:0001007,4.80e-07,145;UBERON:0001555,4.80e-07,145;UBERON:0007026,4.80e-07,145;UBERON:0003101,7.09e-07,22;UBERON:0000079,7.09e-07,22 | |||
|phase1_expression=0.181678379270557,3.8538094300377,1.9733616573436,0,1.78784437770915,0.872338524100369,2.53299878168311,1.26343974685366,3.65659879479774,0.491467873003018,0,1.09220686065086,0.791300934685361,16.8322240025663,10.2733186475654,0,0.602694528023977,0.730310090387373,1.46379839637152,0.369363174230364,0.408001382488506,0,1.14494394852423,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.671746422719773,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.579386075843295,0,0.486634870302636,0.283604451492204,0.665188192387692,0.527008714158756,13.228886625269,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,0.71153252537342,0,2.01414658554573,0,0.732186172644509,0,0,0.267899184852239,0,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.633152558322899,0.926864265692532,0,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.326923806226917,4.38936540170301,4.60940739583999,0.468642863667593,0.936480230490962,1.1409436430889,0.448346041655403,0.704606991862589,0.161872944368132,0,2.85815839756851,0.245668634623536,3.20309921644873,0,0.247266929278557,0,0.718618141816238,0,0,0.277064115484183,0,0.30648779579902,0.751190294532984,0.113432183160021,0,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0,0.744467425326359,0.168776332241266,0.292311015483596,0,0.552299391853796,1.93975268182574,0,0.302256294682921,0.169560592310488,0,0.272746120590835,0,0.365921118388786,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0,0,3.21620469096443,0,0,1.44375896333917,4.8505788016336,3.37169380156203,2.89213235860178,4.63234685476055,5.88274499049497,3.79632990577755,5.12358971008625,3.33576490713088,2.30848294167834,0.738155454624648,0,0,1.47008711385542,24.0834566161479,1.96565443335525,0,0,0.860919069801795,0.171567810298526,0,0,0.201057944823262,1.48141512253647,0.325808305310325,2.07986957055916,0,0,0.469634776943287,0,0,0,4.74122638775565,4.29243081047436,0.492434012174795,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.432359860250884,0.12624243342638,0,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.448524337381443,3.92364061949952,0.2933531432838,0.258543431515556,3.57656445851882,0,0,2.08014873822732,0.257207374262142,0,1.3321108950805,0.142977993658148,0,0,0.325736184293735,0,0,1.20575750823834,0.871533458600294,0.599837947092342,0,0,0,0,0,1.42636905040718,0.434343920002738,1.2328579353023,0.537182889719687,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,6.37995756939527,16.0054566739097,6.78162559249339,0.207970861530807,0.535286966391485,0.157702415033935,0.468565659970853,1.50473049863859,0,1.03473071292505,1.32845119707087,0.553107505625109,1.47702144595741,11.5522682903017,9.26487244289311,0,0,0,0.303127571446259,0,0.907170879989041,0.992431231275107,0.306923946576125,0.280660094433074,0.384417447767103,0,0.64341568457443,0,0,0.532685175939381,0.739144404124282,0,0.464841513839837,1.69203229428271,0.40101294060657,0,1.14814448164607,0.546273504020151,5.11385218341754,0.451199612907412,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0,0,1.35473218771926,1.50506932156456,0.764628819135115,0,0,0,0.261435451024901,1.02580050046556,0.328014645699706,0,31.2214265292598,0,0,0,0,1.6068392984416,0.096670718292122,3.08097234229289,2.6095624703442,0.413509717453592,2.68550612170684,2.90033387828457,0.511359764496605,0.267096106940212,0,0,0,0.10115778085555,0.929691098594572,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,3.72158369359667,1.58189712359363,1.33441135746677,0.255897791311334,0.855877976067841,0.318203247925937,0,0.899362287916574,0.54907405947211,0.235624804691373,1.2130948894399,1.58510321173008,0,0,0.243713489631284,0,2.8664981395677,1.97967604735198,0,0.551365343546124,0,0.438450885253763,2.89387767133344,4.59126326432643,0,0,0,0.143411352204052,0.0982490410131212,0,1.06428319221179,0.422215270595328,1.31717957183961,1.13841952129715,3.49934720244983,0,0.670302275535787,0,31.6323170609978,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,3.92064345569651,0,0,0,0,0,0,0.423347165447766,0,0,0,0.313359791546046,2.50634477090067,0.846458889008016,0,0,0,0,0,0,0,0,8.63059139075251,2.46174797895425,4.59774653409171,0,1.4098700508785,0,0.73254089635947,0.121360521749513,0,0.284136146806413,0,0,0,0.994147647766298,0.984685914873589,0.111308705022906,0,0.422250816255987,0.19924798825107,3.59169090190492,1.51159648712566,0,0,0,1.25815691606258,0,0,0.394573622547734,0,0,5.81599647657131,0.834912883456661,0,9.3753993990684,19.5035799991516,2.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| ||
|short_description=p3@CMBL | |short_description=p3@CMBL | ||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p3@CMBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CMBL_5end |
Coexpression cluster: | C4444_Nucleus_small_Pericytes_Anulus_colon_skeletal_lung |
Association with transcript: | 77bp_to_ENST00000514202_5end |
EntrezGene: | CMBL |
HGNC: | 25090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 6.75e-10 | 9 |
subdivision of digestive tract | 1.68e-07 | 118 |
mesenchyme | 1.89e-07 | 160 |
entire embryonic mesenchyme | 1.89e-07 | 160 |
intervertebral cartilage | 3.31e-07 | 5 |
symphysis | 3.31e-07 | 5 |
nonsynovial joint | 3.31e-07 | 5 |
fibrous joint | 3.31e-07 | 5 |
cartilaginous joint | 3.31e-07 | 5 |
developing mesenchymal condensation | 3.31e-07 | 5 |
pre-cartilage condensation | 3.31e-07 | 5 |
cartilaginous condensation | 3.31e-07 | 5 |
cartilage element | 3.31e-07 | 5 |
post-cranial axial skeletal system | 3.31e-07 | 5 |
vertebral column | 3.31e-07 | 5 |
intervertebral disk | 3.31e-07 | 5 |
intervertebral joint | 3.31e-07 | 5 |
digestive system | 4.80e-07 | 145 |
digestive tract | 4.80e-07 | 145 |
primitive gut | 4.80e-07 | 145 |
male organism | 7.09e-07 | 22 |
male reproductive system | 7.09e-07 | 22 |