FFCP PHASE1:Hg19::chr6:105405037..105405048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389421 | |EntrezGene=389421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32207 | |HGNC=32207 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN17 | |UniProt=Q6ZN17 | ||
|association_with_transcript=114bp_to_ENST00000345080,NM_001004317,uc003pqv.1_5end | |association_with_transcript=114bp_to_ENST00000345080,NM_001004317,uc003pqv.1_5end | ||
|cluster_id=chr6:105405037..105405048,+ | |||
|coexpression_cluster_id=C1967 | |coexpression_cluster_id=C1967 | ||
|description=CAGE_peak_10_at_LIN28B_5end | |description=CAGE_peak_10_at_LIN28B_5end | ||
|id=chr6:105405037..105405048,+ | |id=chr6:105405037..105405048,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.12e-13!5;CL:0000039!2.15e-09!7;CL:0000586!2.15e-09!7 | |ontology_enrichment_celltype=CL:0002322!1.12e-13!5;CL:0000039!2.15e-09!7;CL:0000586!2.15e-09!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.51e-30;10!UBERON:0007687;2.51e-30;10!UBERON:0003104;3.83e-18;31 | |||
|ontology_enrichment_disease=DOID:3095!8.19e-24!22;DOID:2994!8.19e-24!22;DOID:171!4.27e-14!10;DOID:162!3.02e-11!235;DOID:14566!7.41e-11!239;DOID:169!9.16e-11!6;DOID:74!3.99e-09!2;DOID:1036!2.32e-08!8;DOID:2531!1.66e-07!51;DOID:0060083!1.66e-07!51;DOID:8692!3.40e-07!31;DOID:1240!6.47e-07!39;DOID:0050687!8.84e-07!143 | |ontology_enrichment_disease=DOID:3095!8.19e-24!22;DOID:2994!8.19e-24!22;DOID:171!4.27e-14!10;DOID:162!3.02e-11!235;DOID:14566!7.41e-11!239;DOID:169!9.16e-11!6;DOID:74!3.99e-09!2;DOID:1036!2.32e-08!8;DOID:2531!1.66e-07!51;DOID:0060083!1.66e-07!51;DOID:8692!3.40e-07!31;DOID:1240!6.47e-07!39;DOID:0050687!8.84e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!3.16e-08!8;UBERON:0000013!1.21e-07!5;UBERON:0002410!1.21e-07!5 | |ontology_enrichment_uberon=UBERON:0000473!3.16e-08!8;UBERON:0000013!1.21e-07!5;UBERON:0002410!1.21e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.78e-13;24!UBERON:0011143;3.78e-13;24!UBERON:0000489;5.14e-11;29!UBERON:0006554;1.13e-10;30!UBERON:0001008;1.13e-10;30!UBERON:0005172;2.00e-08;52!UBERON:0005173;2.00e-08;52!UBERON:0002417;3.18e-08;58!UBERON:0000916;3.18e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.25e-12,26;UBERON:0003918,3.25e-12,26;UBERON:0011143,3.25e-12,26;UBERON:0005095,3.25e-12,26;UBERON:0007687,3.25e-12,26;UBERON:0000489,2.29e-10,31;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0006554,4.50e-07,47;UBERON:0001008,6.12e-07,48 | |||
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| ||
|short_description=p10@LIN28B | |short_description=p10@LIN28B | ||
}} | }} |
Latest revision as of 13:55, 19 September 2015
Short description: | p10@LIN28B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LIN28B_5end |
Coexpression cluster: | C1967_anaplastic_embryonic_hepatoblastoma_chronic_hepatocellular_Wilms_hereditary |
Association with transcript: | 114bp_to_ENST00000345080, NM_001004317, uc003pqv.1_5end |
EntrezGene: | LIN28B |
HGNC: | 32207 |
UniProt: | Q6ZN17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.25e-12 | 26 |
kidney mesenchyme | 3.25e-12 | 26 |
upper urinary tract | 3.25e-12 | 26 |
kidney rudiment | 3.25e-12 | 26 |
kidney field | 3.25e-12 | 26 |
cavitated compound organ | 2.29e-10 | 31 |
abdomen element | 2.40e-10 | 54 |
abdominal segment element | 2.40e-10 | 54 |
abdominal segment of trunk | 2.30e-09 | 60 |
abdomen | 2.30e-09 | 60 |
urinary system structure | 4.50e-07 | 47 |
renal system | 6.12e-07 | 48 |