FFCP PHASE1:Hg19::chr18:43304110..43304121,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6563 | |EntrezGene=6563 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10918 | |HGNC=10918 | ||
|TSSclassifier=strong | |||
|UniProt=Q13336,G0W2N5 | |UniProt=Q13336,G0W2N5 | ||
|association_with_transcript=18bp_to_ENST00000321925,ENST00000415427,NM_001128588,NM_001146036,NM_015865,uc002lbf.3,uc002lbg.3,uc002lbh.3,uc002lbi.3,uc010dnk.2,uc010xcn.1,uc010xco.1_5end | |association_with_transcript=18bp_to_ENST00000321925,ENST00000415427,NM_001128588,NM_001146036,NM_015865,uc002lbf.3,uc002lbg.3,uc002lbh.3,uc002lbi.3,uc010dnk.2,uc010xcn.1,uc010xco.1_5end | ||
|cluster_id=chr18:43304110..43304121,+ | |||
|description=CAGE_peak_2_at_SLC14A1_5end | |description=CAGE_peak_2_at_SLC14A1_5end | ||
|id=chr18:43304110..43304121,+ | |id=chr18:43304110..43304121,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.74e-10!180;CL:0000680!3.50e-10!57;CL:0000056!3.50e-10!57;CL:0000355!3.50e-10!57;CL:0000192!4.87e-10!42;CL:0000514!4.87e-10!42;CL:0000187!3.29e-09!54;CL:0000359!3.38e-09!32;CL:0000183!1.52e-08!59;CL:0000393!3.31e-07!60;CL:0000211!3.31e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.74e-10!180;CL:0000680!3.50e-10!57;CL:0000056!3.50e-10!57;CL:0000355!3.50e-10!57;CL:0000192!4.87e-10!42;CL:0000514!4.87e-10!42;CL:0000187!3.29e-09!54;CL:0000359!3.38e-09!32;CL:0000183!1.52e-08!59;CL:0000393!3.31e-07!60;CL:0000211!3.31e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-10;32!CL:0000192;1.63e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.39e-11,32;CL:0000192,1.90e-09,43;CL:0000514,1.90e-09,43;CL:0000187,1.59e-07,55;CL:0000680,1.85e-07,58;CL:0000056,1.85e-07,58;CL:0000355,1.85e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.63e-07;43!UBERON:0006601;5.28e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.42e-29!115;UBERON:0001049!1.62e-28!57;UBERON:0005068!1.62e-28!57;UBERON:0006241!1.62e-28!57;UBERON:0007135!1.62e-28!57;UBERON:0002616!1.86e-24!59;UBERON:0002780!5.23e-22!41;UBERON:0001890!5.23e-22!41;UBERON:0006240!5.23e-22!41;UBERON:0000955!1.06e-21!69;UBERON:0006238!1.06e-21!69;UBERON:0003080!4.04e-21!42;UBERON:0002020!1.22e-20!34;UBERON:0003528!1.22e-20!34;UBERON:0001893!1.44e-20!34;UBERON:0001017!5.25e-20!82;UBERON:0002791!6.78e-20!33;UBERON:0001869!6.83e-19!32;UBERON:0005743!1.05e-18!86;UBERON:0003075!4.21e-18!86;UBERON:0007284!4.21e-18!86;UBERON:0002346!3.20e-17!90;UBERON:0000025!1.38e-16!194;UBERON:0000477!1.92e-16!286;UBERON:0000073!4.72e-16!94;UBERON:0001016!4.72e-16!94;UBERON:0004111!5.54e-16!241;UBERON:0002619!1.21e-15!22;UBERON:0001950!6.95e-14!20;UBERON:0000956!1.10e-13!25;UBERON:0000203!1.10e-13!25;UBERON:0000483!1.76e-13!309;UBERON:0000033!2.17e-13!123;UBERON:0000153!2.36e-13!129;UBERON:0007811!2.36e-13!129;UBERON:0000119!5.71e-13!312;UBERON:0000475!1.27e-11!365;UBERON:0000914!1.97e-11!83;UBERON:0002329!1.97e-11!83;UBERON:0003077!1.97e-11!83;UBERON:0003059!1.97e-11!83;UBERON:0007282!1.97e-11!83;UBERON:0009618!1.97e-11!83;UBERON:0007285!1.97e-11!83;UBERON:0000481!2.71e-11!347;UBERON:0003056!2.81e-11!61;UBERON:0002050!2.20e-10!605;UBERON:0005423!2.20e-10!605;UBERON:0000922!2.68e-10!612;UBERON:0000468!3.25e-10!659;UBERON:0000923!4.54e-10!604;UBERON:0005291!4.54e-10!604;UBERON:0006598!4.54e-10!604;UBERON:0002532!4.54e-10!604;UBERON:0002385!1.85e-09!63;UBERON:0001015!1.85e-09!63;UBERON:0000383!1.85e-09!63;UBERON:0001134!2.17e-09!61;UBERON:0002036!2.17e-09!61;UBERON:0003082!2.17e-09!61;UBERON:0000486!3.39e-09!82;UBERON:0004121!3.79e-09!169;UBERON:0004290!4.57e-09!70;UBERON:0001637!5.65e-09!42;UBERON:0003509!5.65e-09!42;UBERON:0004572!5.65e-09!42;UBERON:0000924!6.85e-09!173;UBERON:0006601!6.85e-09!173;UBERON:0002420!8.84e-09!9;UBERON:0007245!8.84e-09!9;UBERON:0010009!8.84e-09!9;UBERON:0010011!8.84e-09!9;UBERON:0000454!8.84e-09!9;UBERON:0002308!1.05e-08!9;UBERON:0000125!1.05e-08!9;UBERON:0003076!1.60e-08!15;UBERON:0003057!1.60e-08!15;UBERON:0000467!3.22e-08!625;UBERON:0000480!4.12e-08!626;UBERON:0004573!1.02e-07!33;UBERON:0004571!1.02e-07!33;UBERON:0009663!4.26e-07!7;UBERON:0005256!6.50e-07!143;UBERON:0001871!6.54e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!9.42e-29!115;UBERON:0001049!1.62e-28!57;UBERON:0005068!1.62e-28!57;UBERON:0006241!1.62e-28!57;UBERON:0007135!1.62e-28!57;UBERON:0002616!1.86e-24!59;UBERON:0002780!5.23e-22!41;UBERON:0001890!5.23e-22!41;UBERON:0006240!5.23e-22!41;UBERON:0000955!1.06e-21!69;UBERON:0006238!1.06e-21!69;UBERON:0003080!4.04e-21!42;UBERON:0002020!1.22e-20!34;UBERON:0003528!1.22e-20!34;UBERON:0001893!1.44e-20!34;UBERON:0001017!5.25e-20!82;UBERON:0002791!6.78e-20!33;UBERON:0001869!6.83e-19!32;UBERON:0005743!1.05e-18!86;UBERON:0003075!4.21e-18!86;UBERON:0007284!4.21e-18!86;UBERON:0002346!3.20e-17!90;UBERON:0000025!1.38e-16!194;UBERON:0000477!1.92e-16!286;UBERON:0000073!4.72e-16!94;UBERON:0001016!4.72e-16!94;UBERON:0004111!5.54e-16!241;UBERON:0002619!1.21e-15!22;UBERON:0001950!6.95e-14!20;UBERON:0000956!1.10e-13!25;UBERON:0000203!1.10e-13!25;UBERON:0000483!1.76e-13!309;UBERON:0000033!2.17e-13!123;UBERON:0000153!2.36e-13!129;UBERON:0007811!2.36e-13!129;UBERON:0000119!5.71e-13!312;UBERON:0000475!1.27e-11!365;UBERON:0000914!1.97e-11!83;UBERON:0002329!1.97e-11!83;UBERON:0003077!1.97e-11!83;UBERON:0003059!1.97e-11!83;UBERON:0007282!1.97e-11!83;UBERON:0009618!1.97e-11!83;UBERON:0007285!1.97e-11!83;UBERON:0000481!2.71e-11!347;UBERON:0003056!2.81e-11!61;UBERON:0002050!2.20e-10!605;UBERON:0005423!2.20e-10!605;UBERON:0000922!2.68e-10!612;UBERON:0000468!3.25e-10!659;UBERON:0000923!4.54e-10!604;UBERON:0005291!4.54e-10!604;UBERON:0006598!4.54e-10!604;UBERON:0002532!4.54e-10!604;UBERON:0002385!1.85e-09!63;UBERON:0001015!1.85e-09!63;UBERON:0000383!1.85e-09!63;UBERON:0001134!2.17e-09!61;UBERON:0002036!2.17e-09!61;UBERON:0003082!2.17e-09!61;UBERON:0000486!3.39e-09!82;UBERON:0004121!3.79e-09!169;UBERON:0004290!4.57e-09!70;UBERON:0001637!5.65e-09!42;UBERON:0003509!5.65e-09!42;UBERON:0004572!5.65e-09!42;UBERON:0000924!6.85e-09!173;UBERON:0006601!6.85e-09!173;UBERON:0002420!8.84e-09!9;UBERON:0007245!8.84e-09!9;UBERON:0010009!8.84e-09!9;UBERON:0010011!8.84e-09!9;UBERON:0000454!8.84e-09!9;UBERON:0002308!1.05e-08!9;UBERON:0000125!1.05e-08!9;UBERON:0003076!1.60e-08!15;UBERON:0003057!1.60e-08!15;UBERON:0000467!3.22e-08!625;UBERON:0000480!4.12e-08!626;UBERON:0004573!1.02e-07!33;UBERON:0004571!1.02e-07!33;UBERON:0009663!4.26e-07!7;UBERON:0005256!6.50e-07!143;UBERON:0001871!6.54e-07!7 | ||
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| ||
|short_description=p2@SLC14A1 | |short_description=p2@SLC14A1 | ||
}} | }} |
Latest revision as of 14:28, 19 September 2015
Short description: | p2@SLC14A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC14A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000321925, ENST00000415427, NM_001128588, NM_001146036, NM_015865, uc002lbf.3, uc002lbg.3, uc002lbh.3, uc002lbi.3, uc010dnk.2, uc010xcn.1, uc010xco.1_5end |
EntrezGene: | SLC14A1 |
HGNC: | 10918 |
UniProt: | Q13336G0W2N5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.39e-11 | 32 |
smooth muscle cell | 1.90e-09 | 43 |
smooth muscle myoblast | 1.90e-09 | 43 |
muscle cell | 1.59e-07 | 55 |
muscle precursor cell | 1.85e-07 | 58 |
myoblast | 1.85e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-07 | 58 |