FFCP PHASE1:Hg19::chr22:29196030..29196075,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7494 | |EntrezGene=7494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12801 | |HGNC=12801 | ||
|TSSclassifier=strong | |||
|UniProt=B1AHH1 | |UniProt=B1AHH1 | ||
|association_with_transcript=45bp_to_ENST00000405219,uc003aed.2_5end | |association_with_transcript=45bp_to_ENST00000405219,uc003aed.2_5end | ||
|cluster_id=chr22:29196030..29196075,- | |||
|coexpression_cluster_id=C1491 | |coexpression_cluster_id=C1491 | ||
|description=CAGE_peak_5_at_XBP1_5end | |description=CAGE_peak_5_at_XBP1_5end | ||
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|ontology_enrichment_celltype=CL:0000048!4.34e-10!430;CL:0000723!1.40e-09!436;CL:0000034!1.60e-09!444;CL:0002371!5.66e-09!591;CL:0000012!1.49e-08!682;CL:0000548!2.95e-08!679;CL:0000004!2.95e-08!679;CL:0000255!2.95e-08!679;CL:0000144!6.07e-08!625;CL:0002057!6.46e-08!42;CL:0002320!1.71e-07!365;CL:0000860!1.86e-07!45;CL:0000071!2.87e-07!18;CL:0002546!2.87e-07!18;CL:0000134!3.17e-07!358;CL:0000057!3.84e-07!75 | |ontology_enrichment_celltype=CL:0000048!4.34e-10!430;CL:0000723!1.40e-09!436;CL:0000034!1.60e-09!444;CL:0002371!5.66e-09!591;CL:0000012!1.49e-08!682;CL:0000548!2.95e-08!679;CL:0000004!2.95e-08!679;CL:0000255!2.95e-08!679;CL:0000144!6.07e-08!625;CL:0002057!6.46e-08!42;CL:0002320!1.71e-07!365;CL:0000860!1.86e-07!45;CL:0000071!2.87e-07!18;CL:0002546!2.87e-07!18;CL:0000134!3.17e-07!358;CL:0000057!3.84e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.47e-09;33!CL:0002057;1.47e-09;33 | |ontology_enrichment_celltype_v019=CL:0000860;1.47e-09;33!CL:0002057;1.47e-09;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.93e-10,42;CL:0002057,2.93e-10,42;CL:0000766,7.79e-09,72;CL:0000473,4.52e-08,48;CL:0000234,4.52e-08,48;CL:0000557,4.99e-08,67;CL:0000839,1.42e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.56e-07;42 | |ontology_enrichment_development_v019=CL:0002057;2.56e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.93e-11!84;UBERON:0002049!1.50e-10!79;UBERON:0007798!1.50e-10!79;UBERON:0000055!4.14e-10!69;UBERON:0004535!4.99e-10!110;UBERON:0000926!1.20e-09!448;UBERON:0004120!1.20e-09!448;UBERON:0006603!1.20e-09!448;UBERON:0001981!2.09e-09!60;UBERON:0007500!2.09e-09!60;UBERON:0004537!2.09e-09!60;UBERON:0006965!2.09e-09!60;UBERON:0001009!3.66e-09!113;UBERON:0001637!5.87e-09!42;UBERON:0003509!5.87e-09!42;UBERON:0004572!5.87e-09!42;UBERON:0003914!1.03e-08!118;UBERON:0003081!1.97e-07!216;UBERON:0001986!2.87e-07!18;UBERON:0004638!2.87e-07!18;UBERON:0004852!2.87e-07!18;UBERON:0002384!3.99e-07!375;UBERON:0004573!6.12e-07!33;UBERON:0004571!6.12e-07!33 | |ontology_enrichment_uberon=UBERON:0004872!7.93e-11!84;UBERON:0002049!1.50e-10!79;UBERON:0007798!1.50e-10!79;UBERON:0000055!4.14e-10!69;UBERON:0004535!4.99e-10!110;UBERON:0000926!1.20e-09!448;UBERON:0004120!1.20e-09!448;UBERON:0006603!1.20e-09!448;UBERON:0001981!2.09e-09!60;UBERON:0007500!2.09e-09!60;UBERON:0004537!2.09e-09!60;UBERON:0006965!2.09e-09!60;UBERON:0001009!3.66e-09!113;UBERON:0001637!5.87e-09!42;UBERON:0003509!5.87e-09!42;UBERON:0004572!5.87e-09!42;UBERON:0003914!1.03e-08!118;UBERON:0003081!1.97e-07!216;UBERON:0001986!2.87e-07!18;UBERON:0004638!2.87e-07!18;UBERON:0004852!2.87e-07!18;UBERON:0002384!3.99e-07!375;UBERON:0004573!6.12e-07!33;UBERON:0004571!6.12e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;1.21e-07;21!UBERON:0010191;1.21e-07;21!UBERON:0007500;4.16e-07;56!UBERON:0001981;4.16e-07;56!UBERON:0004537;4.16e-07;56!UBERON:0001637;4.77e-07;42!UBERON:0003509;4.77e-07;42!UBERON:0004572;4.77e-07;42!UBERON:0004573;5.41e-07;33!UBERON:0004571;5.41e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0000947;1.21e-07;21!UBERON:0010191;1.21e-07;21!UBERON:0007500;4.16e-07;56!UBERON:0001981;4.16e-07;56!UBERON:0004537;4.16e-07;56!UBERON:0001637;4.77e-07;42!UBERON:0003509;4.77e-07;42!UBERON:0004572;4.77e-07;42!UBERON:0004573;5.41e-07;33!UBERON:0004571;5.41e-07;33 | ||
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|phase1_expression=1.2717486548939,0.214100523890983,0.704772020479856,1.0007329835313,1.34088328328186,1.74467704820074,0,0,0.261185628199839,0.737201809504527,0,1.09220686065086,0.263766978228454,0.247532705920093,0.662794751455832,0,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0.229240217243854,0.328402357799783,0.629686250509434,1.18009283054671,1.53531759238885,1.08371286321253,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,2.76997704265939,4.21143339687298,1.95309783644267,0,0,0,0.436194716338694,0,0,2.32429036905685,0.822335776043652,0.929119112685311,1.43846196161075,2.56160706529101,2.12834006899727,1.72372840368309,3.22742341791913,0,0.564727018627814,1.63743690034707,2.47195832889593,1.22433556948361,1.92557416245656,3.19668562899521,0,1.39624560335142,1.27867425159808,3.77272010217159,3.40431134814684,5.60540024096017,1.00499466102697,2.08593167368081,0.868755378820466,1.81619850790011,4.78760926783834,4.43047342417238,0.211255286311942,0.212604299965044,0.209658645508376,0.898629049171961,0.750884464207532,0.32145117339416,0,0,0.182664153764634,1.75996244461323,0,0,1.70692089026603,0,1.14950487990897,0.661044872784862,0,0.569212969109448,0,1.91136614062614,0,2.24203425192614,0.790152254325231,0.196709770113833,0.393010762749165,0,0,0,0,0,0.891283655081389,0,0,0,0.128091319725675,0.260118695119756,0.493313713811028,0,0.289803085735052,0.14828656316206,0,0,0.793165398882963,0,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0,1.24930726552346,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,1.34140171940727,0.767175371061182,1.0843174571537,1.50401373190767,1.44846518960824,1.5905718941022,5.35298357332899,0.283604451492204,1.10864698731282,0.43917392846563,0.327447688744282,0,0,0,0,0,0.238490624305342,0.571994910780128,0,2.18638648103376,0.860234595106124,1.38856200643038,2.26123176769604,0.838998872419812,1.10047216776027,1.67195973229448,0,0.71153252537342,0.66944122552934,2.01414658554573,2.28081631715554,0.488124115096339,1.47065232138347,1.62028389576352,0.714397826272638,0.673588117878509,0.900891843866578,1.53316637465883,4.74632829784064,1.28241220751285,0,3.87780264148325,0,1.98788780678127,1.2663051166458,1.72131935057184,1.72101972449288,0.354668382198357,1.12135520028461,3.20246987189115,1.2333377420858,0.622422070799533,0.808264032418128,0.163461903113459,0.908144565869588,1.15235184896,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.485618833104395,0,0.408308342509787,0.245668634623536,0.619954687054593,2.37600571456411,1.7308685049499,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0.554128230968366,1.31693286264251,0.612975591598039,0.751190294532984,0.340296549480063,1.79389635688862,1.2813443329114,0.423863802319124,0.900273288253207,0.824420233907511,1.54584324027377,2.04728541964749,1.85653965465393,1.16924406193438,2.52433774244115,0.828449087780694,0.80823028409406,2.13005755509969,0.604512589365842,0.67824236924195,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0,0,0,0.643240938192885,2.76269842704961,0,1.44375896333917,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.71181185733329,0.539325232640658,0.588664395376038,0,0,0,0.8231480226628,1.47008711385542,5.07020139287323,3.9313088667105,1.18157981336281,0,0.122988438543114,0.343135620597051,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0,1.03993478527958,1.44331342025273,0.34779121492523,1.52631302506568,0.721832238805369,0.462985512576611,0.380508304469197,11.0628615714299,3.43394464837949,0.246217006087397,0.936017060556951,0.148631162288728,1.87467667973554,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0,7.38994856843915,1.84901711427775,1.65862492432618,1.44119953416961,1.76739406796932,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,1.45770409648969,1.30788020649984,0.66004457238855,1.80980402060889,0,0,0.797814349754612,0,0.257207374262142,0,0,1.28680194292333,0,0,0,1.42156779497018,0,0.301439377059586,0,0,0,0,0,1.4377491329495,0,0,1.73737568001095,0.821905290201534,0,0,0.591092280605782,0.862510299438069,0.513372145118994,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.613457458595699,1.00034104211935,0.271265023699736,1.24782516918484,1.78428988797162,0.630809660135739,0.585707074963566,0.902838299183157,0,0,0.664225598535437,0.553107505625109,0.781952530212746,0.195801157462741,0.343143423810856,0.206768026122887,0.647142602455851,0.640365346820666,0,3.32870879020994,0.604780586659361,2.48107807818777,0.920771839728375,1.68396056659844,1.28139149255701,1.53512174720011,1.76939313257968,0,0.154209693802656,0.532685175939381,1.06765302817952,0,0.464841513839837,0.241718899183244,0.40101294060657,0,0.803701137152247,0.910455840033585,0.786746489756545,0,0,0,0,0.105551628892876,0,0.680374821106063,0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| ||
|short_description=p5@XBP1 | |short_description=p5@XBP1 | ||
}} | }} |
Latest revision as of 14:47, 19 September 2015
Short description: | p5@XBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_XBP1_5end |
Coexpression cluster: | C1491_parotid_pancreas_salivary_submaxillary_smallcell_myeloma_lymphangiectasia |
Association with transcript: | 45bp_to_ENST00000405219, uc003aed.2_5end |
EntrezGene: | XBP1 |
HGNC: | 12801 |
UniProt: | B1AHH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.93e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-10 | 42 |
myeloid leukocyte | 7.79e-09 | 72 |
defensive cell | 4.52e-08 | 48 |
phagocyte | 4.52e-08 | 48 |
granulocyte monocyte progenitor cell | 4.99e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.42e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 8.77e-12 | 203 |
artery | 1.52e-09 | 42 |
arterial blood vessel | 1.52e-09 | 42 |
arterial system | 1.52e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 1.98e-09 | 83 |
epithelial tube open at both ends | 2.86e-09 | 59 |
blood vessel | 2.86e-09 | 59 |
blood vasculature | 2.86e-09 | 59 |
vascular cord | 2.86e-09 | 59 |
vessel | 2.42e-08 | 68 |
epithelial tube | 3.74e-08 | 117 |
systemic artery | 5.56e-08 | 33 |
systemic arterial system | 5.56e-08 | 33 |
aorta | 6.01e-08 | 21 |
aortic system | 6.01e-08 | 21 |
mesoderm | 1.60e-07 | 315 |
mesoderm-derived structure | 1.60e-07 | 315 |
presumptive mesoderm | 1.60e-07 | 315 |
bone marrow | 1.68e-07 | 76 |
musculoskeletal system | 5.75e-07 | 167 |
bone element | 6.17e-07 | 82 |