FFCP PHASE1:Hg19::chr3:72496287..72496310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23429 | |EntrezGene=23429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10480 | |HGNC=10480 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N488 | |UniProt=Q8N488 | ||
|association_with_transcript=-218bp_to_ENST00000477973_5end | |association_with_transcript=-218bp_to_ENST00000477973_5end | ||
|cluster_id=chr3:72496287..72496310,- | |||
|description=CAGE_peak_1_at_RYBP_5end | |description=CAGE_peak_1_at_RYBP_5end | ||
|id=chr3:72496287..72496310,- | |id=chr3:72496287..72496310,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.05e-13!86;UBERON:0000073!1.55e-13!94;UBERON:0001016!1.55e-13!94;UBERON:0001017!1.63e-13!82;UBERON:0002616!1.07e-12!59;UBERON:0001049!1.13e-12!57;UBERON:0005068!1.13e-12!57;UBERON:0006241!1.13e-12!57;UBERON:0007135!1.13e-12!57;UBERON:0007023!4.65e-12!115;UBERON:0002780!1.59e-11!41;UBERON:0001890!1.59e-11!41;UBERON:0006240!1.59e-11!41;UBERON:0002346!1.94e-11!90;UBERON:0000955!2.54e-11!69;UBERON:0006238!2.54e-11!69;UBERON:0003080!2.61e-11!42;UBERON:0003075!3.10e-11!86;UBERON:0007284!3.10e-11!86;UBERON:0001869!1.31e-10!32;UBERON:0001950!2.72e-10!20;UBERON:0002020!4.20e-10!34;UBERON:0003528!4.20e-10!34;UBERON:0001893!4.27e-10!34;UBERON:0002619!8.64e-10!22;UBERON:0002791!1.29e-09!33;UBERON:0000956!2.66e-09!25;UBERON:0000203!2.66e-09!25;UBERON:0003056!2.90e-09!61;UBERON:0000924!1.27e-07!173;UBERON:0006601!1.27e-07!173;UBERON:0004121!2.25e-07!169 | |ontology_enrichment_uberon=UBERON:0005743!1.05e-13!86;UBERON:0000073!1.55e-13!94;UBERON:0001016!1.55e-13!94;UBERON:0001017!1.63e-13!82;UBERON:0002616!1.07e-12!59;UBERON:0001049!1.13e-12!57;UBERON:0005068!1.13e-12!57;UBERON:0006241!1.13e-12!57;UBERON:0007135!1.13e-12!57;UBERON:0007023!4.65e-12!115;UBERON:0002780!1.59e-11!41;UBERON:0001890!1.59e-11!41;UBERON:0006240!1.59e-11!41;UBERON:0002346!1.94e-11!90;UBERON:0000955!2.54e-11!69;UBERON:0006238!2.54e-11!69;UBERON:0003080!2.61e-11!42;UBERON:0003075!3.10e-11!86;UBERON:0007284!3.10e-11!86;UBERON:0001869!1.31e-10!32;UBERON:0001950!2.72e-10!20;UBERON:0002020!4.20e-10!34;UBERON:0003528!4.20e-10!34;UBERON:0001893!4.27e-10!34;UBERON:0002619!8.64e-10!22;UBERON:0002791!1.29e-09!33;UBERON:0000956!2.66e-09!25;UBERON:0000203!2.66e-09!25;UBERON:0003056!2.90e-09!61;UBERON:0000924!1.27e-07!173;UBERON:0006601!1.27e-07!173;UBERON:0004121!2.25e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.22e-11;20!UBERON:0002619;4.31e-10;22!UBERON:0001869;1.51e-09;32!UBERON:0000956;2.27e-09;25!UBERON:0000203;2.27e-09;25!UBERON:0001893;7.53e-09;34!UBERON:0003528;7.65e-09;34!UBERON:0002020;7.65e-09;34!UBERON:0002791;1.11e-08;32!UBERON:0002780;1.89e-08;41!UBERON:0001890;1.89e-08;41!UBERON:0000073;7.87e-08;53!UBERON:0002616;7.87e-08;53!UBERON:0000922;8.84e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0001950;9.22e-11;20!UBERON:0002619;4.31e-10;22!UBERON:0001869;1.51e-09;32!UBERON:0000956;2.27e-09;25!UBERON:0000203;2.27e-09;25!UBERON:0001893;7.53e-09;34!UBERON:0003528;7.65e-09;34!UBERON:0002020;7.65e-09;34!UBERON:0002791;1.11e-08;32!UBERON:0002780;1.89e-08;41!UBERON:0001890;1.89e-08;41!UBERON:0000073;7.87e-08;53!UBERON:0002616;7.87e-08;53!UBERON:0000922;8.84e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.09e-13,81;UBERON:0001016,3.16e-13,89;UBERON:0001049,9.77e-13,56;UBERON:0005068,9.77e-13,56;UBERON:0006241,9.77e-13,56;UBERON:0007135,9.77e-13,56;UBERON:0000073,4.93e-12,53;UBERON:0002616,4.93e-12,53;UBERON:0007023,9.35e-12,114;UBERON:0002780,2.14e-11,41;UBERON:0001890,2.14e-11,41;UBERON:0003080,2.14e-11,41;UBERON:0006240,2.14e-11,41;UBERON:0000955,3.14e-11,68;UBERON:0006238,3.14e-11,68;UBERON:0001869,1.46e-10,32;UBERON:0001950,2.60e-10,20;UBERON:0003528,4.63e-10,34;UBERON:0002020,4.63e-10,34;UBERON:0001893,4.71e-10,34;UBERON:0002619,8.28e-10,22;UBERON:0002791,1.10e-09,32;UBERON:0002346,2.28e-09,86;UBERON:0000956,2.55e-09,25;UBERON:0000203,2.55e-09,25;UBERON:0003075,3.75e-09,82;UBERON:0007284,3.75e-09,82;UBERON:0003056,6.92e-09,61;UBERON:0011216,3.53e-07,223 | |||
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| ||
|short_description=p1@RYBP | |short_description=p1@RYBP | ||
}} | }} |
Latest revision as of 14:57, 19 September 2015
Short description: | p1@RYBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RYBP_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_ENST00000477973_5end |
EntrezGene: | RYBP |
HGNC: | 10480 |
UniProt: | Q8N488 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.09e-13 | 81 |
nervous system | 3.16e-13 | 89 |
neural tube | 9.77e-13 | 56 |
neural rod | 9.77e-13 | 56 |
future spinal cord | 9.77e-13 | 56 |
neural keel | 9.77e-13 | 56 |
regional part of nervous system | 4.93e-12 | 53 |
regional part of brain | 4.93e-12 | 53 |
adult organism | 9.35e-12 | 114 |
regional part of forebrain | 2.14e-11 | 41 |
forebrain | 2.14e-11 | 41 |
anterior neural tube | 2.14e-11 | 41 |
future forebrain | 2.14e-11 | 41 |
brain | 3.14e-11 | 68 |
future brain | 3.14e-11 | 68 |
cerebral hemisphere | 1.46e-10 | 32 |
neocortex | 2.60e-10 | 20 |
brain grey matter | 4.63e-10 | 34 |
gray matter | 4.63e-10 | 34 |
telencephalon | 4.71e-10 | 34 |
regional part of cerebral cortex | 8.28e-10 | 22 |
regional part of telencephalon | 1.10e-09 | 32 |
neurectoderm | 2.28e-09 | 86 |
cerebral cortex | 2.55e-09 | 25 |
pallium | 2.55e-09 | 25 |
neural plate | 3.75e-09 | 82 |
presumptive neural plate | 3.75e-09 | 82 |
pre-chordal neural plate | 6.92e-09 | 61 |
organ system subdivision | 3.53e-07 | 223 |