FFCP PHASE1:Hg19::chr17:33759386..33759395,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:33759386..33759395,-
|short_description=p10@SLFN12
|description=CAGE_peak_10_at_SLFN12_5end
|association_with_transcript=147bp_to_ENST00000304905,NM_01804...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55106 | |EntrezGene=55106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25500 | |HGNC=25500 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYM2 | |UniProt=Q8IYM2 | ||
|association_with_transcript=147bp_to_ENST00000304905,NM_018042,uc002hji.3_5end | |||
|cluster_id=chr17:33759386..33759395,- | |||
|description=CAGE_peak_10_at_SLFN12_5end | |||
|id=chr17:33759386..33759395,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.48e-24;6!CL:0000404;9.48e-24;6!CL:0000319;1.65e-16;1!CL:0000159;6.42e-09;2!CL:0002097;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.24e-24,6;CL:0000031,7.24e-24,6;CL:0000404,7.24e-24,6;CL:0000047,4.43e-18,8;CL:0000319,1.21e-16,1;CL:0000159,5.49e-09,2;CL:0002097,6.42e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000031;9.48e-24;6!UBERON:0000358;6.99e-17;1!UBERON:0003099;1.65e-16;1!UBERON:0003852;1.65e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.65e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.21e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002046!5.30e-07!5;UBERON:0004117!5.30e-07!5;UBERON:0007689!5.30e-07!5;UBERON:0007123!5.30e-07!5;UBERON:0003091!5.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.65e-16;1!UBERON:0008193;1.65e-16;1!UBERON:0010912;1.65e-16;1!UBERON:0002514;1.65e-16;1!UBERON:0003457;1.65e-16;1!UBERON:0008907;1.65e-16;1!UBERON:0008001;1.65e-16;1!UBERON:0007213;1.65e-16;1!UBERON:0009891;1.65e-16;1!UBERON:0007914;1.65e-16;1!UBERON:0007375;1.65e-16;1!UBERON:0003323;1.65e-16;1!UBERON:0010258;1.65e-16;1!UBERON:0005253;1.65e-16;1!UBERON:0007842;1.65e-16;1!UBERON:0002397;1.65e-16;1!UBERON:0003113;1.65e-16;1!UBERON:0003277;1.65e-16;1!UBERON:0001709;1.65e-16;1!UBERON:0002244;1.65e-16;1!UBERON:0005620;1.65e-16;1!UBERON:0010364;1.65e-16;1!UBERON:0004288;1.65e-16;1!UBERON:0004089;6.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,2.63e-16,1;UBERON:0008193,2.63e-16,1;UBERON:0010912,2.63e-16,1;UBERON:0002514,2.63e-16,1;UBERON:0003457,2.63e-16,1;UBERON:0008907,2.63e-16,1;UBERON:0008001,2.63e-16,1;UBERON:0007213,2.63e-16,1;UBERON:0009891,2.63e-16,1;UBERON:0007914,2.63e-16,1;UBERON:0009292,2.63e-16,1;UBERON:0003099,2.63e-16,1;UBERON:0007375,2.63e-16,1;UBERON:0003323,2.63e-16,1;UBERON:0010258,2.63e-16,1;UBERON:0007842,2.63e-16,1;UBERON:0009494,2.63e-16,1;UBERON:0010042,2.63e-16,1;UBERON:0010045,2.63e-16,1;UBERON:0010259,2.63e-16,1;UBERON:0010359,2.63e-16,1;UBERON:0009526,2.63e-16,1;UBERON:0002397,2.63e-16,1;UBERON:0003113,2.63e-16,1;UBERON:0003277,2.63e-16,1;UBERON:0001709,2.63e-16,1;UBERON:0004066,2.63e-16,1;UBERON:0002244,2.63e-16,1;UBERON:0005620,2.63e-16,1;UBERON:0004362,2.63e-16,1;UBERON:0010364,2.63e-16,1;UBERON:0010046,2.63e-16,1;UBERON:0005868,2.63e-16,1;UBERON:0007238,2.63e-16,1;UBERON:0004288,2.63e-16,1;UBERON:0004068,2.63e-16,1;UBERON:0010334,2.63e-16,1;UBERON:0003852,2.63e-16,1;UBERON:0010253,2.63e-16,1;UBERON:0005253,8.09e-09,2;UBERON:0004089,8.09e-09,2 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,1.05927344650575,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0.408308342509787,0,0.206651562351531,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0.42793898803392,0,0,0.719489830333259,0,0,0,0,0,0,0.487426979262569,0,0.682499557039929,0.848432591722276,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.556543525114529,0,0,0,0,0,0.715880777515084,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.524759999977174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0.569219092059585,0,0.347119476670262,0,0.0870592065804026,0,0.687944129886466,0,0,0,0,0.353024506766001,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,1.28602518772015,3.71356478812531,2.9080823662043,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,1.07220795687463,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,5.7010451559141,0,0,0,0,1.05802783107205,0.918736432059601,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0.340853619036631,0,0.22910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.378499274505237,0.874124575709564,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0.448527450322454,0.0636471582781649,0.202117188958219,0,0,0,0,0,0.244209805832924,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,1.05927344650575,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0.408308342509787,0,0.206651562351531,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0.42793898803392,0,0,0.719489830333259,0,0,0,0,0,0,0.487426979262569,0,0.682499557039929,0.848432591722276,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.556543525114529,0,0,0,0,0,0.715880777515084,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.524759999977174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0.569219092059585,0,0.347119476670262,0,0.0870592065804026,0,0.687944129886466,0,0,0,0,0.353024506766001,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,1.28602518772015,3.71356478812531,2.9080823662043,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,1.07220795687463,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,5.7010451559141,0,0,0,0,1.05802783107205,0.918736432059601,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0.340853619036631,0,0.22910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.378499274505237,0.874124575709564,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0.448527450322454,0.0636471582781649,0.202117188958219,0,0,0,0,0,0.244209805832924,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | ||
|short_description=p10@SLFN12 | |||
}} | }} |
Latest revision as of 14:58, 19 September 2015
Short description: | p10@SLFN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLFN12_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000304905, NM_018042, uc002hji.3_5end |
EntrezGene: | SLFN12 |
HGNC: | 25500 |
UniProt: | Q8IYM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.24e-24 | 6 |
neuroblast | 7.24e-24 | 6 |
electrically signaling cell | 7.24e-24 | 6 |
neuronal stem cell | 4.43e-18 | 8 |
mucus secreting cell | 1.21e-16 | 1 |
seromucus secreting cell | 5.49e-09 | 2 |
cortical cell of adrenal gland | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.21e-16 | 1 |