FFCP PHASE1:Hg19::chr6:106546786..106546802,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=639 | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |HGNC=9346 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481163_5end | |association_with_transcript=0bp_to_ENST00000481163_5end | ||
|cluster_id=chr6:106546786..106546802,+ | |||
|coexpression_cluster_id=C1199 | |coexpression_cluster_id=C1199 | ||
|description=CAGE_peak_6_at_PRDM1_5end | |description=CAGE_peak_6_at_PRDM1_5end | ||
|id=chr6:106546786..106546802,+ | |id=chr6:106546786..106546802,+ | ||
|ontology_enrichment_celltype=CL:0000791;1.87e-29;18!CL:0000789;1.87e-29;18!CL:0002419;1.87e-29;18!CL:0000084;1.48e-24;25!CL:0000625;3.71e-19;11!CL:0000624;1.17e-10;6!CL:0000542;8.83e-09;53!CL:0000623;8.30e-07;3 | |ontology_enrichment_celltype=CL:0000791!9.76e-16!18;CL:0000789!9.76e-16!18;CL:0002420!9.76e-16!18;CL:0002419!9.76e-16!18;CL:0000790!9.76e-16!18;CL:0000084!7.17e-14!25;CL:0000827!7.17e-14!25;CL:0000838!3.31e-11!52;CL:0000542!9.94e-11!53;CL:0000051!9.94e-11!53;CL:0000625!1.80e-10!11;CL:0002087!1.69e-08!119;CL:0000738!3.86e-08!140 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;1.87e-29;18!CL:0000789;1.87e-29;18!CL:0002419;1.87e-29;18!CL:0000084;1.48e-24;25!CL:0000625;3.71e-19;11!CL:0000624;1.17e-10;6!CL:0000542;8.83e-09;53!CL:0000623;8.30e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.16e-29,18;CL:0000789,1.16e-29,18;CL:0002420,1.16e-29,18;CL:0002419,1.16e-29,18;CL:0000790,1.16e-29,18;CL:0000084,1.06e-24,25;CL:0000827,1.06e-24,25;CL:0000625,3.34e-19,11;CL:0000838,1.61e-17,52;CL:0000542,5.04e-17,53;CL:0000051,5.04e-17,53;CL:0002087,1.22e-13,115;CL:0000738,5.29e-13,136;CL:0000624,7.37e-11,6;CL:0002031,6.05e-10,120;CL:0000988,6.53e-09,177;CL:0000037,3.11e-08,168;CL:0002032,3.77e-07,161;CL:0000837,3.77e-07,161;CL:0000623,8.36e-07,3;CL:0000825,8.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.87e-29;18!CL:0000051;8.83e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;4.30e-22;15!UBERON:0000179;4.30e-22;15!UBERON:0000463;4.30e-22;15!UBERON:0002390;1.32e-11;32!UBERON:0002193;2.83e-07;42 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.51e-14!115;UBERON:0000178!4.36e-12!15;UBERON:0000179!4.36e-12!15;UBERON:0000463!4.36e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.30e-22;15!UBERON:0000179;4.30e-22;15!UBERON:0000463;4.30e-22;15!UBERON:0002390;1.32e-11;32!UBERON:0002193;2.83e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.09e-22,15;UBERON:0000179,2.09e-22,15;UBERON:0000463,2.09e-22,15;UBERON:0002390,1.71e-07,98;UBERON:0003061,1.71e-07,98;UBERON:0002193,2.24e-07,108 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.23150884174919,2.36132343941038,3.14691421479123,15.3531759238885,3.09632246632152,0,0.30120591877825,1.84877005083394,0.154934401160603,0,0,2.76997704265939,4.61252229181326,1.95309783644267,0,2.59114932815184,1.28787783817093,0.290796477559129,0,0,0.464858073811369,0,0,1.43846196161075,1.0246428261164,0.945928919554341,1.37898272294647,0,0,0.564727018627814,0,0.224723484445085,0.612167784741805,0,0,0,0.398927315243264,0.852449501065388,0.580418477257168,0.56738522469114,1.24564449799115,1.7587406567972,0.521482918420201,2.82345498116652,0,1.84138817993782,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,2.24203425192614,0,7.67168103443949,5.89516144123747,8.42966145897988,10.0311897234407,1.95553359980154,2.8406868344084,1.94826728407911,6.46180649934007,20.3278076157638,17.2796437775224,29.5176211503867,6.27647466655808,7.02320476823343,1.64437904603676,3.31620021343018,3.76744011455568,0.741432815810302,0,0,2.94604291013672,6.89796888483458,8.59068613706575,13.6630633690532,5.09704662918555,5.85975108470777,3.8018081777935,8.43220666835528,9.85496905889022,9.99445812418767,5.6826540490564,9.03240796613151,16.5317529444281,9.09296665663925,8.97911304073354,0,0,0.12786256184353,0,0,0,0,0,0,0,0.263504357079378,0.589405839739707,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,1.74437620857014,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.386521706326594,0.545492241181669,0.860413786167011,0,0.132529768321485,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,1.44375896333917,0.828147600278907,1.01150814046861,0,0.992645754591546,1.52515610864684,0.71181185733329,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,3.37205259772859,0.603173834469785,3.14800713539001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,0.425325291727159,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,18.3238606987792,17.4658335636209,15.2728213172901,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,12.4060815673732,5.39285502046542,10.4593006647375,0,0,0,0.496215615637554,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.232420756919918,0,1.40354529212299,2.85451065701279,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,1.30012049207304,0,0,0,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,1.15699440752685,0.192190067365106,1.40373983744043,0.910420027699949,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.974853958525138,0,0,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,2.21310859268678,2.01090682660736,0,0.753150406214233,5.16606447205476,1.68471475667626,0.443430153536676,2.06751060186264,5.07447609232169,3.0585488285695,2.84823593587081,4.2881719582402,3.70226045777575,1.94541993357815,4.32025149790492,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0.561421621224659,3.36968812325356,0,0.111443384277478,0,0.23874448473769,0,0.614321404198464,0.994147647766298,0.281338832821026,0,0.824019371133798,0,0.398495976502139,1.10513566212459,0,0,0.861593638227486,0,0.179736702294654,0.179021174675609,0,3.15658898038188,2.3948309234694,0,0.969332746095218,0.556608588971108,0,0,0,0.724999575434793,0,0.762760950878299,0,0,0,0,0,0.241192877250816,1.52581736317083,0.110579259931225,0,0.438770794307945,0,1.81250867562184,0.615602068030377,0,0,0,0,0.638002319463839,1.37396390102793,0,0,0,0,0,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0.995261931078505,1.23840590304675,0.611030144933625,2.96521128680622,2.34771483998355,1.8795950910982,0.337005664903385,0,0,0,1.17398771359254,0,0.394584402849391,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0.873633341210151,0,0,0.0730893170861856,0.164230914106418,1.26085721434945,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,1.06726497369676,0,1.00863292007874,0,0,0.14405479798815,0,2.82832841540154,0,0,0,0,0.600420288709789,0.684526894459965,0,0,3.15464825135177,0,0.458320848023367,0,0,0,0.223171457441873,0.335917362433631,1.08089965062721,0,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.275078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| ||
|short_description=p6@PRDM1 | |short_description=p6@PRDM1 | ||
}} | }} |
Latest revision as of 15:01, 19 September 2015
Short description: | p6@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRDM1_5end |
Coexpression cluster: | C1199_CD4_Natural_CD8_Basophils_Peripheral_mycosis_cord |
Association with transcript: | 0bp_to_ENST00000481163_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.16e-29 | 18 |
alpha-beta T cell | 1.16e-29 | 18 |
immature T cell | 1.16e-29 | 18 |
mature T cell | 1.16e-29 | 18 |
immature alpha-beta T cell | 1.16e-29 | 18 |
T cell | 1.06e-24 | 25 |
pro-T cell | 1.06e-24 | 25 |
CD8-positive, alpha-beta T cell | 3.34e-19 | 11 |
lymphoid lineage restricted progenitor cell | 1.61e-17 | 52 |
lymphocyte | 5.04e-17 | 53 |
common lymphoid progenitor | 5.04e-17 | 53 |
nongranular leukocyte | 1.22e-13 | 115 |
leukocyte | 5.29e-13 | 136 |
CD4-positive, alpha-beta T cell | 7.37e-11 | 6 |
hematopoietic lineage restricted progenitor cell | 6.05e-10 | 120 |
hematopoietic cell | 6.53e-09 | 177 |
hematopoietic stem cell | 3.11e-08 | 168 |
hematopoietic oligopotent progenitor cell | 3.77e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-07 | 161 |
natural killer cell | 8.36e-07 | 3 |
pro-NK cell | 8.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.09e-22 | 15 |
haemolymphatic fluid | 2.09e-22 | 15 |
organism substance | 2.09e-22 | 15 |
hematopoietic system | 1.71e-07 | 98 |
blood island | 1.71e-07 | 98 |
hemolymphoid system | 2.24e-07 | 108 |