FFCP PHASE1:Hg19::chr3:72937278..72937291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=727936 | |EntrezGene=727936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33383 | |HGNC=33383 | ||
|TSSclassifier=strong | |||
|UniProt=A0PJZ3 | |UniProt=A0PJZ3 | ||
|association_with_transcript=54bp_to_ENST00000389617_5end | |association_with_transcript=54bp_to_ENST00000389617_5end | ||
|cluster_id=chr3:72937278..72937291,+ | |||
|coexpression_cluster_id=C4344 | |coexpression_cluster_id=C4344 | ||
|description=CAGE_peak_3_at_GXYLT2_5end | |description=CAGE_peak_3_at_GXYLT2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!8.96e-15!180;CL:0000057!6.62e-07!75 | |ontology_enrichment_celltype=CL:0000055!8.96e-15!180;CL:0000057!6.62e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002549;2.18e-09;2!CL:0000746;3.89e-07;3 | |ontology_enrichment_celltype_v019=CL:0002549;2.18e-09;2!CL:0000746;3.89e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.25e-09,2;CL:0000746,3.52e-07,3;CL:0000513,3.52e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;3.89e-07;3 | |ontology_enrichment_development_v019=CL:0000513;3.89e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.15e-07!365;UBERON:0000119!5.23e-07!312 | |ontology_enrichment_uberon=UBERON:0000475!5.15e-07!365;UBERON:0000119!5.23e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.18e-09;2!UBERON:0005358;2.18e-09;2!UBERON:0001886;2.18e-09;2!UBERON:0004086;2.18e-09;2!UBERON:0005282;2.18e-09;2!UBERON:0005281;2.18e-09;2!UBERON:0005284;3.99e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0005629;2.18e-09;2!UBERON:0005358;2.18e-09;2!UBERON:0001886;2.18e-09;2!UBERON:0004086;2.18e-09;2!UBERON:0005282;2.18e-09;2!UBERON:0005281;2.18e-09;2!UBERON:0005284;3.99e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.25e-09,2;UBERON:0005358,1.25e-09,2;UBERON:0001886,1.25e-09,2;UBERON:0004086,1.25e-09,2;UBERON:0005282,1.25e-09,2;UBERON:0005281,1.25e-09,2;UBERON:0005284,3.37e-08,5 | |||
|phase1_expression=0,0.856402095563933,0.845726424575827,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.861847406537515,0.612002073732759,0.626909442956176,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,0.511450247374121,0,0,0.579386075843295,1.5905718941022,2.91980922181582,0.0945348171640679,0,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,1.72101972449288,0.709336764396714,0.560677600142307,3.20246987189115,1.48000529050296,0.933633106199299,0,0,1.36221684880438,1.72852777344,0.468642863667593,0,0,0,0.352303495931295,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0.336672227908132,0,0,1.31693286264251,0,0.600952235626387,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0.646584227275248,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,1.2347220339942,0,0,0,0,4.41463099414651,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.939269553886573,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.74384027533312,0.07333828582095,1.42198887333556,0,0,0.26593811658487,0,0.514414748524284,0,0.799266537048298,0.857867961948885,1.08524321078289,0,0.325736184293735,2.13235169245527,0,2.1100756394171,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0.623912584592421,0.356857977594324,0.315404830067869,0.468565659970853,1.80567659836631,4.5481500811197,0,0,0.921845842708516,0.173767228936166,0.587403472388222,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.512556597022804,1.02341449813341,1.28683136914886,0,0.462629081407967,0.355123450626254,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,1.27463817604702,0.393373244878272,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0.183138929636687,0.495056999523528,0,0.650060246036521,0,1.35339005608971,0.462145851343933,0.767518373630648,0,0,0,0.596586391912706,6.49933860221183,0,0,0,0,0.464845549297286,0,0,0.616067160352178,0,0,0.55597265731176,0.286249773483982,0.372158369359667,1.2655176988749,0.953150969619124,0.255897791311334,1.28381696410176,0.318203247925937,0,1.07923474549989,0,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0,0.848432591722276,0,0.551365343546124,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.860468113224309,0.88424136911809,0,0,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0.355709216742071,1.59426272728822,0,0,0,0,0.842391534340376,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,2.11486539543521,0,0,0.597743964753209,0,0.251932747854276,0.409074730008619,0,0,0,0,0,0.591860433821602,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.923403102045565,2.16489906109302,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0.802577647298789,0.468528891450678,0,0,0,0,0,0,1.89559738885464,0,0.414752765588989,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,2.75177651954586,0,0,0,0.387956065953678,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0.240476460754601,0.640358984218058,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0.104602846312333,0.713987523454252,0.866851769704557,0,0,0,0.859530882839914,0,0.837847203816763,0.458320848023367,0,0.399358000997982,0,0.446342914883745,0.739018197353989,0.360299883542404,1.16495949527454,0.315132729228895,0.164831716762333,0.13480708770837,0,0,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,0.242998226632099,0.335434687599266,0,0.629455057619977,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,1.41483874589699,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.310482014706917,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0,0.895528817321244,0.467426619694449,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0.621748802331122,0.443565449968902,0.796483835818512,0.899606224327209,2.17368139626763,0,0,0.521745061811734,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| ||
|short_description=p3@GXYLT2 | |short_description=p3@GXYLT2 | ||
}} | }} |
Latest revision as of 15:06, 19 September 2015
Short description: | p3@GXYLT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GXYLT2_5end |
Coexpression cluster: | C4344_pleomorphic_Skeletal_Hodgkin_mesenchymal_Osteoblast_Chondrocyte_epithelioid |
Association with transcript: | 54bp_to_ENST00000389617_5end |
EntrezGene: | GXYLT2 |
HGNC: | 33383 |
UniProt: | A0PJZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.25e-09 | 2 |
cardiac muscle cell | 3.52e-07 | 3 |
cardiac muscle myoblast | 3.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.25e-09 | 2 |
ventricle of nervous system | 1.25e-09 | 2 |
choroid plexus | 1.25e-09 | 2 |
brain ventricle | 1.25e-09 | 2 |
ventricular system of brain | 1.25e-09 | 2 |
ventricular system of central nervous system | 1.25e-09 | 2 |
brain vasculature | 3.37e-08 | 5 |