FFCP PHASE1:Hg19::chr3:72937303..72937320,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=727936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33383 | |||
|TSSclassifier=strong | |||
|UniProt=A0PJZ3 | |||
|association_with_transcript=-64bp_to_NM_001080393,uc003dpg.2_5end | |||
|cluster_id=chr3:72937303..72937320,+ | |||
|coexpression_cluster_id=C4344 | |||
|description=CAGE_peak_2_at_GXYLT2_5end | |||
|id=chr3:72937303..72937320,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.69e-27!180;CL:0000183!2.65e-15!59;CL:0000680!9.43e-15!57;CL:0000056!9.43e-15!57;CL:0000355!9.43e-15!57;CL:0000187!3.83e-14!54;CL:0000393!1.78e-12!60;CL:0000211!1.78e-12!60;CL:0000192!3.06e-11!42;CL:0000514!3.06e-11!42;CL:0000057!2.93e-10!75;CL:0000359!5.87e-10!32;CL:0002494!1.79e-08!16;CL:0000499!1.98e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.90e-11;16!CL:0000499;5.20e-08;28!CL:0002539;9.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.50e-12,427;CL:0002494,7.33e-12,16;CL:0000723,1.72e-11,433;CL:0000034,9.61e-11,441;CL:0000187,1.44e-09,55;CL:0000680,1.08e-08,58;CL:0000056,1.08e-08,58;CL:0000355,1.08e-08,58;CL:0000499,3.43e-08,28;CL:0000393,6.53e-08,61;CL:0000211,6.53e-08,61;CL:0000192,3.15e-07,43;CL:0000514,3.15e-07,43;CL:0000359,7.43e-07,32;CL:0002539,8.13e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.58e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.64e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.56e-15!61;UBERON:0002036!3.56e-15!61;UBERON:0003082!3.56e-15!61;UBERON:0002385!2.20e-14!63;UBERON:0001015!2.20e-14!63;UBERON:0000383!2.20e-14!63;UBERON:0004290!4.51e-14!70;UBERON:0000914!9.28e-13!83;UBERON:0002329!9.28e-13!83;UBERON:0003077!9.28e-13!83;UBERON:0003059!9.28e-13!83;UBERON:0007282!9.28e-13!83;UBERON:0009618!9.28e-13!83;UBERON:0007285!9.28e-13!83;UBERON:0005256!1.32e-12!143;UBERON:0000119!7.76e-12!312;UBERON:0000486!1.07e-11!82;UBERON:0000481!1.19e-11!347;UBERON:0000475!1.94e-11!365;UBERON:0000483!3.18e-11!309;UBERON:0002100!2.39e-10!216;UBERON:0000948!9.44e-10!24;UBERON:0005498!9.44e-10!24;UBERON:0004140!9.44e-10!24;UBERON:0009881!9.44e-10!24;UBERON:0004141!9.44e-10!24;UBERON:0003084!9.44e-10!24;UBERON:0007005!9.44e-10!24;UBERON:0004139!9.44e-10!24;UBERON:0004291!9.44e-10!24;UBERON:0000490!2.97e-09!138;UBERON:0003914!4.43e-09!118;UBERON:0004872!2.19e-08!84;UBERON:0007100!3.79e-08!27;UBERON:0004573!2.10e-07!33;UBERON:0004571!2.10e-07!33;UBERON:0003104!3.77e-07!238;UBERON:0009142!3.77e-07!238;UBERON:0004535!3.85e-07!110;UBERON:0000477!5.58e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.21e-12;22!UBERON:0007100;1.55e-10;25!UBERON:0004573;2.26e-07;33!UBERON:0004571;2.26e-07;33!UBERON:0003688;3.45e-07;6!UBERON:0002358;3.45e-07;6!UBERON:0003684;3.45e-07;6!UBERON:0001178;3.45e-07;6!UBERON:0000947;3.54e-07;21!UBERON:0010191;3.54e-07;21!UBERON:0004237;9.77e-07;10!UBERON:0004695;9.77e-07;10!UBERON:0002111;9.77e-07;10!UBERON:0004178;9.77e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,1.69e-11,24;UBERON:0005498,1.69e-11,24;UBERON:0004140,1.69e-11,24;UBERON:0009881,1.69e-11,24;UBERON:0004141,1.69e-11,24;UBERON:0003084,1.69e-11,24;UBERON:0007005,1.69e-11,24;UBERON:0004139,1.69e-11,24;UBERON:0004291,1.69e-11,24;UBERON:0007100,1.12e-09,27;UBERON:0004872,1.21e-09,83;UBERON:0001134,2.23e-09,62;UBERON:0002036,2.23e-09,62;UBERON:0003082,2.23e-09,62;UBERON:0003914,2.92e-09,117;UBERON:0004573,6.82e-09,33;UBERON:0004571,6.82e-09,33;UBERON:0002385,7.73e-09,64;UBERON:0001015,7.73e-09,64;UBERON:0000383,7.73e-09,64;UBERON:0007524,8.63e-09,73;UBERON:0002329,1.48e-08,71;UBERON:0003059,1.48e-08,71;UBERON:0007282,1.48e-08,71;UBERON:0004290,1.48e-08,71;UBERON:0009618,1.48e-08,71;UBERON:0007503,1.61e-08,78;UBERON:0005256,1.91e-08,122;UBERON:0003104,2.37e-08,160;UBERON:0009142,2.37e-08,160;UBERON:0003077,2.52e-08,72;UBERON:0007285,2.52e-08,72;UBERON:0004535,7.19e-08,109;UBERON:0001048,1.45e-07,160;UBERON:0000490,1.48e-07,148;UBERON:0001009,2.16e-07,112;UBERON:0000947,2.97e-07,21;UBERON:0010191,2.97e-07,21;UBERON:0003688,3.89e-07,6;UBERON:0002358,3.89e-07,6;UBERON:0003684,3.89e-07,6;UBERON:0001178,3.89e-07,6;UBERON:0000486,7.22e-07,83;UBERON:0004237,8.13e-07,10;UBERON:0004695,8.13e-07,10;UBERON:0002111,8.13e-07,10;UBERON:0004178,8.13e-07,10 | |||
|phase1_expression=1.2717486548939,0.856402095563933,2.25527046553554,2.00146596706261,1.34088328328186,2.61701557230111,2.53299878168311,0.631719873426831,0,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,2.01697543935533,1.80808358407193,2.92124036154949,2.43966399395253,2.83178433576612,0.816002764977012,4.70182082217132,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37770945674,3.06870148424473,0.361439152384566,2.50668955317945,2.60723734129483,3.1811437882044,3.89307896242109,0.378139268656271,0.886917589850256,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0.993943903390637,1.51956613997496,2.38336525463794,4.87622255272983,1.41867352879343,2.80338800071154,6.4049397437823,1.97334038733728,2.8008993185979,1.61652806483626,0.980771418680752,2.27036141467397,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0.989067717114227,1.82032272387605,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,1.05166641234618,0.680593098960126,0.358779271377724,1.70845911054854,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0.37223371266318,0.843881661206331,1.16924406193438,0.504867548488229,0.552299391853796,2.42469085228218,0.355009592516614,0.604512589365842,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,2.4694440679884,4.41026134156626,0,0,0.590789906681404,16.7755977777567,0.122988438543114,1.88724591328378,0.219500570817251,0,0,0.185176890317059,1.3032332212413,0,0,0.34779121492523,2.46558257895225,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.205654985406647,0,0,0.448524337381443,5.66748089483264,0.36669142910475,3.10252117818667,0,0,0.531876233169741,0,1.28603687131071,0,0.266422179016099,2.43062589218851,2.71310802695722,1.64648067356154,0.65147236858747,1.42156779497018,0,5.42590878707255,0.871533458600294,4.29883862082845,0,0,0,0.239624855491583,0,0,0.579125226670317,0.821905290201534,0.537182889719687,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.858840442033979,1.00034104211935,0,1.03985430765404,0.535286966391485,0.473107245101804,0.702848489956279,5.11608369537122,6.82222512167955,0,1.99267679560631,0.921845842708516,0.260650843404249,0.979005787313703,2.05886054286514,0,0,0,0,0,0.30239029332968,1.24053903909388,0.767309866440312,0.280660094433074,1.40953064181271,3.07024349440022,1.93024705372329,0,0.308419387605311,1.42049380250502,1.8067974323038,1.03850885836724,0.232420756919918,0.241718899183244,0.200506470303285,0,1.60740227430449,1.45672934405374,1.44236856455367,0.902399225814824,0.0770153371044148,0,0,0.633309773357254,0,0,0.431831832204279,0,1.89662506280697,2.50844886927427,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,1.00726411300178,1.07262349896764,0,0,4.82051789532479,3.48014585851639,0.616194468458578,1.84204409671355,0.413509717453592,1.71872391789238,0.870100163485371,0.93749290157711,16.6489906659399,0,0.192190067365106,0,0,1.39453664789186,1.25924938732256,0.6970372701606,0.924100740528266,2.12922412126809,1.73986598415015,0.37064843820784,1.71749864090389,2.232950216158,0.632758849437452,1.5250415513906,0.255897791311334,0.42793898803392,2.86382923133343,1.56989728039846,0.899362287916574,1.37268514868027,2.00281083987667,1.81964233415984,1.58510321173008,0.842516912477962,0.48763373908959,0.731140468893853,0,0.682499557039929,2.96951407102797,0,2.75682671773062,0.66343897524122,0.876901770507525,0,3.27947376023316,0,0.92947049429925,0.845086807596724,0.717056761020258,0.88424136911809,1.07001315444375,0,0.633322905892992,0.329294892959902,0.379473173765715,2.0996083214699,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,1.20941133692304,5.26106700005114,0,0,0.211673582723883,0,1.68478306868075,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0.146508179271894,0.121360521749513,0,0.568272293612826,0,0,0,0,0.422008249231538,8.57077028676375,0.659215496907038,0.211125408127993,2.39097585901284,0.552567831062295,0,2.45444838005172,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0.32681539055697,0,0.615602068030377,8.31777007683109,0.23056390438806,0,0,0,0.183195186803725,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,1.22206028986725,0.29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| |||
|short_description=p2@GXYLT2 | |||
}} |
Latest revision as of 15:07, 19 September 2015
Short description: | p2@GXYLT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GXYLT2_5end |
Coexpression cluster: | C4344_pleomorphic_Skeletal_Hodgkin_mesenchymal_Osteoblast_Chondrocyte_epithelioid |
Association with transcript: | -64bp_to_NM_001080393, uc003dpg.2_5end |
EntrezGene: | GXYLT2 |
HGNC: | 33383 |
UniProt: | A0PJZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.50e-12 | 427 |
cardiocyte | 7.33e-12 | 16 |
somatic stem cell | 1.72e-11 | 433 |
stem cell | 9.61e-11 | 441 |
muscle cell | 1.44e-09 | 55 |
muscle precursor cell | 1.08e-08 | 58 |
myoblast | 1.08e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-08 | 58 |
stromal cell | 3.43e-08 | 28 |
electrically responsive cell | 6.53e-08 | 61 |
electrically active cell | 6.53e-08 | 61 |
smooth muscle cell | 3.15e-07 | 43 |
smooth muscle myoblast | 3.15e-07 | 43 |
vascular associated smooth muscle cell | 7.43e-07 | 32 |
aortic smooth muscle cell | 8.13e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.64e-07 | 14 |