FFCP PHASE1:Hg19::chr17:33864674..33864722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506736 | |EntrezGene=100506736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33920 | |HGNC=33920 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_ENST00000361112,uc002hjn.2_5end | |association_with_transcript=157bp_to_ENST00000361112,uc002hjn.2_5end | ||
|cluster_id=chr17:33864674..33864722,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_SLFN12L_5end | |description=CAGE_peak_1_at_SLFN12L_5end | ||
|id=chr17:33864674..33864722,- | |id=chr17:33864674..33864722,- | ||
|ontology_enrichment_celltype=CL:0000738!1.23e-21!140;CL:0000791!8.19e-20!18;CL:0000789!8.19e-20!18;CL:0002420!8.19e-20!18;CL:0002419!8.19e-20!18;CL:0000790!8.19e-20!18;CL:0002087!1.08e-19!119;CL:0000037!2.20e-18!172;CL:0000566!2.20e-18!172;CL:0000988!3.43e-18!182;CL:0000838!1.58e-17!52;CL:0000084!1.67e-17!25;CL:0000827!1.67e-17!25;CL:0002031!4.13e-17!124;CL:0002032!5.41e-17!165;CL:0000837!5.41e-17!165;CL:0000542!6.02e-17!53;CL:0000051!6.02e-17!53;CL:0000625!7.54e-13!11;CL:0000624!1.83e-07!6;CL:0000080!7.28e-07!6 | |ontology_enrichment_celltype=CL:0000738!1.23e-21!140;CL:0000791!8.19e-20!18;CL:0000789!8.19e-20!18;CL:0002420!8.19e-20!18;CL:0002419!8.19e-20!18;CL:0000790!8.19e-20!18;CL:0002087!1.08e-19!119;CL:0000037!2.20e-18!172;CL:0000566!2.20e-18!172;CL:0000988!3.43e-18!182;CL:0000838!1.58e-17!52;CL:0000084!1.67e-17!25;CL:0000827!1.67e-17!25;CL:0002031!4.13e-17!124;CL:0002032!5.41e-17!165;CL:0000837!5.41e-17!165;CL:0000542!6.02e-17!53;CL:0000051!6.02e-17!53;CL:0000625!7.54e-13!11;CL:0000624!1.83e-07!6;CL:0000080!7.28e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.78e-30;18!CL:0000789;2.78e-30;18!CL:0002419;2.78e-30;18!CL:0000084;6.76e-28;25!CL:0000625;2.66e-19;11!CL:0000542;1.71e-11;53!CL:0000624;7.61e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.91e-30,18;CL:0000789,2.91e-30,18;CL:0002420,2.91e-30,18;CL:0002419,2.91e-30,18;CL:0000790,2.91e-30,18;CL:0000084,7.21e-28,25;CL:0000827,7.21e-28,25;CL:0000838,4.82e-22,52;CL:0000542,1.91e-21,53;CL:0000051,1.91e-21,53;CL:0000625,2.72e-19,11;CL:0000738,5.75e-16,136;CL:0002087,2.33e-15,115;CL:0000988,8.04e-15,177;CL:0000037,5.33e-14,168;CL:0002032,4.53e-12,161;CL:0000837,4.53e-12,161;CL:0002031,1.74e-11,120;CL:0000624,7.76e-11,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.78e-30;18!CL:0000051;1.71e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.64e-36!115;UBERON:0000178!3.41e-15!15;UBERON:0000179!3.41e-15!15;UBERON:0000463!3.41e-15!15;UBERON:0002390!2.46e-12!102;UBERON:0003061!2.46e-12!102;UBERON:0002193!2.75e-11!112 | |ontology_enrichment_uberon=UBERON:0007023!4.64e-36!115;UBERON:0000178!3.41e-15!15;UBERON:0000179!3.41e-15!15;UBERON:0000463!3.41e-15!15;UBERON:0002390!2.46e-12!102;UBERON:0003061!2.46e-12!102;UBERON:0002193!2.75e-11!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.56e-23;15!UBERON:0000179;5.56e-23;15!UBERON:0000463;5.56e-23;15!UBERON:0002390;1.29e-14;32!UBERON:0002193;7.84e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.55e-23,15;UBERON:0000179,5.55e-23,15;UBERON:0000463,5.55e-23,15;UBERON:0007023,3.91e-10,114;UBERON:0002390,1.50e-08,98;UBERON:0003061,1.50e-08,98;UBERON:0002193,2.14e-08,108;UBERON:0004177,2.96e-08,7;UBERON:0005057,2.96e-08,7;UBERON:0002370,3.55e-07,4;UBERON:0005058,3.55e-07,4;UBERON:0009113,3.55e-07,4;UBERON:0003295,3.55e-07,4;UBERON:0005562,3.55e-07,4;UBERON:0003408,5.99e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.393553906568396,9.8341069212226,39.9182574021101,6.65709330259127,0,0,0,0,0,0,6.09394949385065,7.2196001089251,13.4546739843828,1.34349284543955,0.971680998056939,1.03030227053675,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,1.22433556948361,0.641858054152187,0,0.659702600373432,0.199463657621632,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0,1.21079900526674,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,2.18455444504853,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0,1.17447437874188,0,0,5.60508562981536,0,46.8169252870923,36.1569901729232,36.5970668219126,162.505273519739,51.4957181281073,55.8668410766985,52.6032166701361,90.9109328183016,51.5560338080965,54.2758041729872,81.5119629932697,111.439448161337,125.247151700163,129.7415067323,140.938509070783,174.751260698237,72.5121293862476,88.8235549257847,68.9934457112847,145.26257733828,79.7098626691996,76.9725477881091,96.4005026594306,73.9071761231904,70.9680964703496,68.4325472002829,63.3921251317423,80.6315650272836,113.686961162635,68.4286258407209,60.7634717721574,56.8531015893745,33.6974646687219,41.2749551065977,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.70272798147026,0,0,6.16640047943898,6.09454080547435,2.6591592103773,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,128.561660160576,52.6072129739146,32.7753913786466,52.8773309472563,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3837181127556,28.4742745080574,36.8210074421883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,1.41215701165169,0,0,0,0,30.4468565539302,23.7037534214136,34.7484784176239,45.0258055615221,52.2430086819467,25.9389324477087,37.802200606668,30.9318818754765,0,0,0,0,0,0,0,0.199579371432817,2.48956981172077,0,0,0,0,0,0,6.09450400085772,16.5405717356811,7.06298975168666,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,111.889157814588,0,0,0.890894042497916,0,0,0.562677665642051,0,3.13127361030843,0,1.9924798825107,5.24939439509181,0,0,1.84627208191604,0,0,0,0.511572370226872,0.493217028184668,16.7638164642858,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,2.13213910407454,0,3.76752615348059,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.32686346755009,1.22206028986725,6.22694370229306,5.06612149680662,5.53436332378913,0.404406797884062,0.802577647298789,0,0,0,0,1.18375320854817,4.83962864194656,0,3.03295582216742,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.775912131907355,0,0,0,0,0.759729551470544,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.916641696046735,0,0.399358000997982,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0,0.242998226632099,0,0.709251365692784,0.104909176269996,0,0,0,2.1440859791201,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.258565912723101,0.79339561045614,0,0,2.99004755189545,1.88645166119599,7.45630299624952,7.93865634899121,3.35939774226505,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.554645257684261,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0.779441235357554,0.531459361253452,0,0,0,0,15.9989916683944,0,2.41100971525142,0,0,0,0,0,0,0,0,0.509197589862076,0,1.73510069962603,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.317079050969534,0,1.64477330057155,3.96968942711435,0,0,0,0.336283722218824,0,1.13831095675649,0.354809480650555,1.84374380089247,0,1.08751572762931,0.197318320688547,0,0,0.706437835654626,0,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,1.72090943528111,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,4.55327532836874,3.49695296806332,0,0.245148321753905,0,0.785233868459781,0.891139200981258,0.4226557275834,0,4.79317981697253,9.08856220427438,0,0,0,0,0,4.12856355064087,1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| ||
|short_description=p1@SLFN12L | |short_description=p1@SLFN12L | ||
}} | }} |
Latest revision as of 15:13, 19 September 2015
Short description: | p1@SLFN12L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLFN12L_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 157bp_to_ENST00000361112, uc002hjn.2_5end |
EntrezGene: | SLFN12L |
HGNC: | 33920 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.91e-30 | 18 |
alpha-beta T cell | 2.91e-30 | 18 |
immature T cell | 2.91e-30 | 18 |
mature T cell | 2.91e-30 | 18 |
immature alpha-beta T cell | 2.91e-30 | 18 |
T cell | 7.21e-28 | 25 |
pro-T cell | 7.21e-28 | 25 |
lymphoid lineage restricted progenitor cell | 4.82e-22 | 52 |
lymphocyte | 1.91e-21 | 53 |
common lymphoid progenitor | 1.91e-21 | 53 |
CD8-positive, alpha-beta T cell | 2.72e-19 | 11 |
leukocyte | 5.75e-16 | 136 |
nongranular leukocyte | 2.33e-15 | 115 |
hematopoietic cell | 8.04e-15 | 177 |
hematopoietic stem cell | 5.33e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.53e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 1.74e-11 | 120 |
CD4-positive, alpha-beta T cell | 7.76e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 5.55e-23 | 15 |
haemolymphatic fluid | 5.55e-23 | 15 |
organism substance | 5.55e-23 | 15 |
adult organism | 3.91e-10 | 114 |
hematopoietic system | 1.50e-08 | 98 |
blood island | 1.50e-08 | 98 |
hemolymphoid system | 2.14e-08 | 108 |
hemopoietic organ | 2.96e-08 | 7 |
immune organ | 2.96e-08 | 7 |
thymus | 3.55e-07 | 4 |
hemolymphoid system gland | 3.55e-07 | 4 |
thymic region | 3.55e-07 | 4 |
pharyngeal gland | 3.55e-07 | 4 |
thymus primordium | 3.55e-07 | 4 |
gland of gut | 5.99e-07 | 10 |