FFCP PHASE1:Hg19::chr18:43913919..43913967,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:43913919..43913967,+ to FFCP PHASE1:Hg19::chr18:43913919..43913967,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=494470 | |EntrezGene=494470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31696 | |HGNC=31696 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSG1,B3KVD1 | |UniProt=Q6ZSG1,B3KVD1 | ||
|association_with_transcript=-219bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end | |||
|cluster_id=chr18:43913919..43913967,+ | |||
|coexpression_cluster_id=C1799 | |||
|description=CAGE_peak_2_at_RNF165_5end | |||
|id=chr18:43913919..43913967,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.52e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.96e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.98e-25!82;UBERON:0005743!1.29e-23!86;UBERON:0000073!1.37e-23!94;UBERON:0001016!1.37e-23!94;UBERON:0000955!6.60e-22!69;UBERON:0006238!6.60e-22!69;UBERON:0001049!4.77e-21!57;UBERON:0005068!4.77e-21!57;UBERON:0006241!4.77e-21!57;UBERON:0007135!4.77e-21!57;UBERON:0007023!6.42e-21!115;UBERON:0002616!8.62e-20!59;UBERON:0003075!4.14e-17!86;UBERON:0007284!4.14e-17!86;UBERON:0003080!4.15e-17!42;UBERON:0002346!5.56e-17!90;UBERON:0002780!6.84e-17!41;UBERON:0001890!6.84e-17!41;UBERON:0006240!6.84e-17!41;UBERON:0000924!4.63e-15!173;UBERON:0006601!4.63e-15!173;UBERON:0004121!5.94e-15!169;UBERON:0001893!6.41e-15!34;UBERON:0002020!7.69e-15!34;UBERON:0003528!7.69e-15!34;UBERON:0001869!8.56e-15!32;UBERON:0002791!2.40e-14!33;UBERON:0001950!1.07e-12!20;UBERON:0003056!1.29e-12!61;UBERON:0000153!1.63e-12!129;UBERON:0007811!1.63e-12!129;UBERON:0000956!2.89e-12!25;UBERON:0000203!2.89e-12!25;UBERON:0000033!3.41e-12!123;UBERON:0002619!3.73e-12!22;UBERON:0000065!9.02e-10!53;UBERON:0008947!1.46e-08!38;UBERON:0003258!1.46e-08!38;UBERON:0000064!1.77e-08!219;UBERON:0000922!4.55e-08!612;UBERON:0000072!1.22e-07!46;UBERON:0001004!2.05e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.36e-19;20!UBERON:0002619;4.37e-19;22!UBERON:0001869;3.36e-16;32!UBERON:0000956;4.38e-16;25!UBERON:0000203;4.38e-16;25!UBERON:0002791;4.23e-15;32!UBERON:0001893;2.57e-14;34!UBERON:0003528;3.66e-14;34!UBERON:0002020;3.66e-14;34!UBERON:0002780;1.78e-13;41!UBERON:0001890;1.78e-13;41!UBERON:0000073;2.57e-11;53!UBERON:0002616;2.57e-11;53!UBERON:0000955;4.25e-10;68!UBERON:0001017;2.88e-09;75!UBERON:0001016;3.59e-09;83!UBERON:0000922;8.13e-09;49!UBERON:0001737;1.33e-07;9!UBERON:0001557;1.33e-07;9!UBERON:0000200;1.54e-07;6!UBERON:0002021;5.48e-07;5!UBERON:0000072;9.61e-07;37!UBERON:0000065;9.77e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.01e-23,89;UBERON:0011216,3.05e-23,223;UBERON:0001017,1.33e-21,81;UBERON:0000073,7.24e-20,53;UBERON:0002616,7.24e-20,53;UBERON:0001950,8.58e-20,20;UBERON:0001049,1.43e-19,56;UBERON:0005068,1.43e-19,56;UBERON:0006241,1.43e-19,56;UBERON:0007135,1.43e-19,56;UBERON:0000955,1.67e-19,68;UBERON:0006238,1.67e-19,68;UBERON:0002619,1.79e-19,22;UBERON:0002780,8.05e-19,41;UBERON:0001890,8.05e-19,41;UBERON:0003080,8.05e-19,41;UBERON:0006240,8.05e-19,41;UBERON:0001869,1.15e-18,32;UBERON:0001893,4.12e-17,34;UBERON:0002791,6.12e-17,32;UBERON:0003528,6.22e-17,34;UBERON:0002020,6.22e-17,34;UBERON:0000956,2.03e-16,25;UBERON:0000203,2.03e-16,25;UBERON:0002346,3.34e-16,86;UBERON:0003075,1.23e-15,82;UBERON:0007284,1.23e-15,82;UBERON:0003056,3.23e-13,61;UBERON:0004121,3.90e-13,171;UBERON:0000924,3.90e-13,171;UBERON:0006601,3.90e-13,171;UBERON:0010371,2.21e-12,104;UBERON:0007023,9.01e-10,114;UBERON:0010314,1.19e-08,132;UBERON:0000200,1.19e-07,6;UBERON:0001737,1.56e-07,9;UBERON:0000065,2.88e-07,54;UBERON:0002021,4.78e-07,5;UBERON:0001871,8.54e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,1.26343974685366,0.783556884599516,0.737201809504527,0,0,0,0,0,0,0,0,0,0.61560529038394,1.02000345622126,0.940364164434263,0.85870796139317,0.410623275218653,0.251085279189606,0,0,0,0.393364276848904,0.383829398097213,1.39334510984468,1.83884244895785,1.8072355126695,2.58827807116751,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.768547918354051,1.69077151827842,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.567208902984407,0.665188192387692,0.43917392846563,2.16115474571226,0,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0.709336764396714,0,0,0,0.622422070799533,0.134710672069688,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,1.16193942869518,1.34759371519982,1.00928340350251,0,0,0,0,0,0,2.60274960087657,1.51726221070292,2.6511213287183,3.19852520923942,4.13970943775572,2.60997681022206,1.21348177344148,0.98110732562673,2.30848294167834,0,0,0,0,3.80265104465493,1.96565443335525,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.370353780634118,0,0,1.44331342025273,1.39116485970092,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.895585227028483,0.290633938513962,0.383382679165211,3.4486426652716,10.7419089496136,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.36669142910475,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,2.56139988262505,1.2937654491571,5.90377966886842,0.76228387266739,11.712586847186,5.41302168944387,7.203199409377,8.29320377149112,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.937131319941706,0.300946099727719,0,2.0694614258501,0,0.184369168541703,0,0,0,0.413536052245775,0.431428401637234,0.853820462427555,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0.482561763430822,0,0,0.177561725313127,0,0,0,0,0.40101294060657,6.72191219232043,0,0,0.131124414959424,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.03041011647722,2.93022287418699,1.98022799809411,0,1.30012049207304,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.426133137080504,0.178064071293475,1.4875642382488,5.18913181885787,2.04180339991335,5.6648357279108,0.464845549297286,0,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.673554789078584,1.34060455107157,3.26672954583968,1.88287601553558,1.72202149068492,0,3.54744122829341,1.1486170010348,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,1.58625035258854,0.106824071127473,21.1745568157939,1.47024129588619,0,0.144269212976445,0,0.637705090915289,0.199579371432817,0,0,1.94773164164733,0,0,3.91699739432558,0,0.169291777801603,0,0,4.25846237690326,0,0.614481528616916,0.447352215784832,0.166849141711909,2.73543333562856,0,0,0,0,0,0,0.146508179271894,0.485442086998054,0,0.284136146806413,0.71623345421307,0.890894042497916,0,1.9882952955326,5.06409899077846,0,0,0.211125408127993,0.597743964753209,1.65770349318689,0.755798243562828,0.20453736500431,1.6001024709939,0,0,0.537063524026827,0,0.493217028184668,0,0,9.69332746095218,2.04089815956073,19.9613798001194,1.04171104434093,0.0874599999961957,0.724999575434793,1.2517279311405,0.254253650292766,0.945550727071745,2.06846023944879,1.45802306691627,1.38899995946634,0.885741385813839,1.4471572635049,4.5774520895125,5.52896299656123,5.02430952221031,2.63262476584767,1.0893846351899,0.278847488557207,0.384751292518985,0,0.23056390438806,0,0,0.957003479195758,0,0.533034776018635,0,1.56980256395025,0.166211681900156,0,0,0,0,0.476809736941136,0.421996129056054,0,0,0,0,0.176915129006678,4.888241159469,0,0,0,0.67401132980677,4.01288823649394,0.937057782901357,0,0.586993856796269,0,0.789168805698781,0,17.4461474129379,0.379119477770928,0.150323419414493,0.311064574191741,0.664653872707185,0.661983911750998,0.627865836814451,0,0.284609546029793,0.138674673013139,0.347119476670262,1.07791637155815,1.30588809870604,4.89234671077684,0.171986032471617,3.96700958285249,5.0431628789468,3.03827191096874,0.678923115418936,0,6.10148000107438,0,0.397429223405979,3.16553979779394,1.56441106187842,0,0.640358984218058,0.799238438328521,0,0,0,1.58460277786965,0.124252535565433,0.707082103850386,0.2718084121472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| ||
|short_description=p2@RNF165 | |||
}} | }} |
Latest revision as of 15:16, 19 September 2015
Short description: | p2@RNF165 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF165_5end |
Coexpression cluster: | C1799_occipital_duodenum_temporal_Wilms_brain_pineal_parietal |
Association with transcript: | -219bp_to_ENST00000269439, ENST00000543885, NM_152470, uc002lbz.2, uc002lca.1, uc002lcb.1, uc010dnn.1_5end |
EntrezGene: | RNF165 |
HGNC: | 31696 |
UniProt: | Q6ZSG1B3KVD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.96e-07 | 6 |