FFCP PHASE1:Hg19::chr18:43914019..43914036,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=494470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31696 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZSG1,B3KVD1 | |||
|association_with_transcript=-150bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end | |||
|cluster_id=chr18:43914019..43914036,+ | |||
|coexpression_cluster_id=C1799 | |||
|description=CAGE_peak_4_at_RNF165_5end | |||
|id=chr18:43914019..43914036,+ | |||
|ontology_enrichment_celltype=CL:0000047!6.75e-08!8;CL:0002319!1.00e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.44e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.58e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.70e-33!94;UBERON:0001016!7.70e-33!94;UBERON:0001017!1.57e-32!82;UBERON:0005743!3.63e-31!86;UBERON:0000955!3.36e-27!69;UBERON:0006238!3.36e-27!69;UBERON:0002780!1.74e-24!41;UBERON:0001890!1.74e-24!41;UBERON:0006240!1.74e-24!41;UBERON:0001049!2.73e-24!57;UBERON:0005068!2.73e-24!57;UBERON:0006241!2.73e-24!57;UBERON:0007135!2.73e-24!57;UBERON:0002616!3.10e-24!59;UBERON:0003080!1.40e-23!42;UBERON:0001869!7.00e-23!32;UBERON:0001893!2.26e-22!34;UBERON:0002791!2.08e-21!33;UBERON:0002020!2.09e-20!34;UBERON:0003528!2.09e-20!34;UBERON:0007023!1.73e-19!115;UBERON:0000924!6.55e-19!173;UBERON:0006601!6.55e-19!173;UBERON:0004121!1.55e-18!169;UBERON:0003056!7.74e-18!61;UBERON:0002619!9.10e-18!22;UBERON:0002346!1.99e-17!90;UBERON:0000956!2.98e-17!25;UBERON:0000203!2.98e-17!25;UBERON:0003075!3.35e-17!86;UBERON:0007284!3.35e-17!86;UBERON:0000153!1.98e-16!129;UBERON:0007811!1.98e-16!129;UBERON:0001950!4.53e-16!20;UBERON:0000033!7.94e-16!123;UBERON:0000064!2.83e-09!219;UBERON:0000922!1.30e-07!612;UBERON:0001737!6.93e-07!9;UBERON:0002420!8.40e-07!9;UBERON:0007245!8.40e-07!9;UBERON:0010009!8.40e-07!9;UBERON:0010011!8.40e-07!9;UBERON:0000454!8.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.80e-26;32!UBERON:0002619;8.64e-26;22!UBERON:0001950;1.37e-24;20!UBERON:0002791;4.23e-24;32!UBERON:0001893;9.36e-23;34!UBERON:0000956;2.01e-22;25!UBERON:0000203;2.01e-22;25!UBERON:0003528;3.14e-21;34!UBERON:0002020;3.14e-21;34!UBERON:0002780;1.07e-20;41!UBERON:0001890;1.07e-20;41!UBERON:0000955;4.21e-14;68!UBERON:0000073;4.95e-14;53!UBERON:0002616;4.95e-14;53!UBERON:0002021;1.87e-11;5!UBERON:0001016;1.89e-11;83!UBERON:0001017;2.02e-11;75!UBERON:0006947;1.83e-10;3!UBERON:0004054;1.83e-10;3!UBERON:0001905;1.64e-08;2!UBERON:0002757;1.64e-08;2!UBERON:0010134;1.64e-08;2!UBERON:0005408;1.64e-08;2!UBERON:0001899;1.64e-08;2!UBERON:0005904;5.90e-08;4!UBERON:0000013;6.67e-07;5!UBERON:0002410;6.67e-07;5!UBERON:0001872;9.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.24e-32,89;UBERON:0001017,9.61e-30,81;UBERON:0001869,5.39e-29,32;UBERON:0002780,1.09e-27,41;UBERON:0001890,1.09e-27,41;UBERON:0003080,1.09e-27,41;UBERON:0006240,1.09e-27,41;UBERON:0001893,4.50e-27,34;UBERON:0002619,6.11e-26,22;UBERON:0002791,1.20e-25,32;UBERON:0000073,4.50e-25,53;UBERON:0002616,4.50e-25,53;UBERON:0001950,1.34e-24,20;UBERON:0000955,3.77e-24,68;UBERON:0006238,3.77e-24,68;UBERON:0003528,6.16e-24,34;UBERON:0002020,6.16e-24,34;UBERON:0001049,1.88e-23,56;UBERON:0005068,1.88e-23,56;UBERON:0006241,1.88e-23,56;UBERON:0007135,1.88e-23,56;UBERON:0000956,1.49e-22,25;UBERON:0000203,1.49e-22,25;UBERON:0003056,5.44e-19,61;UBERON:0004121,1.21e-16,171;UBERON:0000924,1.21e-16,171;UBERON:0006601,1.21e-16,171;UBERON:0002346,2.50e-16,86;UBERON:0003075,7.41e-16,82;UBERON:0007284,7.41e-16,82;UBERON:0011216,1.12e-14,223;UBERON:0007023,3.90e-13,114;UBERON:0010371,1.37e-12,104;UBERON:0002021,2.34e-11,5;UBERON:0006947,1.64e-10,3;UBERON:0004054,1.64e-10,3;UBERON:0010314,1.23e-09,132;UBERON:0001905,1.59e-08,2;UBERON:0002757,1.59e-08,2;UBERON:0010134,1.59e-08,2;UBERON:0005408,1.59e-08,2;UBERON:0001899,1.59e-08,2;UBERON:0005904,5.44e-08,4;UBERON:0000013,5.70e-07,5;UBERON:0002410,5.70e-07,5;UBERON:0001872,9.24e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.492484232307152,0.612002073732759,0,0,0.136874425072884,0.125542639594803,0,0,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0.90361775633475,0.369754010166788,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.464775771478074,0.932949495138334,0.504641701751257,0.36497735907583,0,0,0,0,0,0.473227200159376,0.674338760312407,0.482022059766964,0.882351781859152,0.653638332277218,0.949082476444386,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,1.15930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,3.87413109658195,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.862510299438069,3.08023287071396,0.76228387266739,2.60279707715243,5.41302168944387,5.36052049069916,4.46557126157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28913384510255,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.660075999364704,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.960950336825531,0.765676274967505,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.886860307073351,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,9.62479855263359,0.245040215981032,0,0.28853842595289,0,0.637705090915289,0,0,0,0.649243880549111,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0.976940477010201,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0.994147647766298,1.1253553312841,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0,0,0,1.93866549219044,1.02044907978036,5.98841394003583,0,0,0,0.227586896570999,0,0.236387681767936,0.689486746482929,0.874813840149763,0.347249989866585,0.885741385813839,0.723578631752448,1.52581736317083,0.442317039724898,1.18219047581419,1.09692698576986,0.21787692703798,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0,0,0,0.337005664903385,0.802577647298789,0.702793337176017,0,0,0,1.18375320854817,0,7.34574627913176,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,1.39781334593624,0,1.06431964417994,2.99666200053361,1.14961639874493,0.193978032976839,0,1.35588444468319,0,0,1.26621591911757,0.586654148204409,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0.806201669840715,0,0,0.0787831823072236,0,0,0.0984274815147488,0,1.59045937961861,0.681017030557878,0.482259445395058,0.137539436597234,0.415440338029185,0,0,1.51873891645062,0,0.0788057072991982,0.209818352539992,0,0,2.49489756515279,0.714695326373367,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,1.77213635993397,0.610131324509816,0.500763722825999,0,0.110929051536852,0.434674820589684,0.691743174681154,0.249960815924213,0,0,0,0.936669811613763,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0.139879507719444,0.622077260032973,2.68578179737669,1.40172254815686,0.943595651135378,4.04075661310451,1.01839517972415,0.212574920101683,0,0.558644917973244,0,0.867479195013787,0,0,0,1.47727217721857,2.8339315265117,0.638535436228605,1.02558182120378,10.8390829375339,1.38314504928436,1.13032951942296,0,0,0.353909170043221,0,0,0,0,0,0,0.20170506870352,0,0,0,0,1.55336444622308,0,0.826747186004736,1.58539525484767,6.01672289920042,0,0.496211178389294,0,0.127762427639595,7.49982570229601,3.36283722218824,0,0.682986574053893,0.0887023701626388,0.115233987555779,0,0.203909198930495,1.11813715056843,0.118193840883968,0.333694205676207,0.235479278551542,1.41404030924402,0,0.913158720509496,0,0,0.428859265059938,0.316027223465453,0,1.21700790611806,0,0.62164849248911,0.3414369541879,0.691259661814092,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,2.3196288626764,0.485710993059139,0.233939463462106,0,0,0.11294608203896,0.879524133963433,3.32118255846682,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0.845855261818682,0.902410431630081,0,0.357107877211315,0,0.320965466756673,0,0,0,0.788857810965923,1.15585533324555,9.5997151874883,1.5870805215462,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0.310298987585686,0,0.952257725854961,0.581300188524055,0.496597714366863,0.560659312903067,0.0636471582781649,1.21270313374932,0,0.684466602170562,0.26940821205835,0.0717222053926763,0,0.651226148887796,0.426909383510862,0,0.269475606319761,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p4@RNF165 | |||
}} |
Latest revision as of 15:17, 19 September 2015
Short description: | p4@RNF165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF165_5end |
Coexpression cluster: | C1799_occipital_duodenum_temporal_Wilms_brain_pineal_parietal |
Association with transcript: | -150bp_to_ENST00000269439, ENST00000543885, NM_152470, uc002lbz.2, uc002lca.1, uc002lcb.1, uc010dnn.1_5end |
EntrezGene: | RNF165 |
HGNC: | 31696 |
UniProt: | Q6ZSG1B3KVD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.44e-07 | 8 |