FFCP PHASE1:Hg19::chr11:66610885..66610931,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9986 | |EntrezGene=9986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13721 | |HGNC=13721 | ||
|TSSclassifier=strong | |||
|UniProt=E9PI08,E9PPV9 | |UniProt=E9PI08,E9PPV9 | ||
|association_with_transcript=0bp_to_ENST00000524506,ENST00000524849_5end | |association_with_transcript=0bp_to_ENST00000524506,ENST00000524849_5end | ||
|cluster_id=chr11:66610885..66610931,+ | |||
|description=CAGE_peak_1_at_RCE1_5end | |description=CAGE_peak_1_at_RCE1_5end | ||
|id=chr11:66610885..66610931,+ | |id=chr11:66610885..66610931,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.50e-26!254;CL:0000012!7.91e-24!682;CL:0000063!2.74e-23!578;CL:0000548!5.50e-23!679;CL:0000004!5.50e-23!679;CL:0000255!5.50e-23!679;CL:0000003!1.42e-19!722;CL:0000144!1.95e-10!625;CL:0000223!1.44e-08!59;CL:0002076!6.32e-08!43;CL:0002371!4.42e-07!591;CL:1000449!5.32e-07!16;CL:1000497!9.05e-07!18;CL:0002518!9.05e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.50e-26!254;CL:0000012!7.91e-24!682;CL:0000063!2.74e-23!578;CL:0000548!5.50e-23!679;CL:0000004!5.50e-23!679;CL:0000255!5.50e-23!679;CL:0000003!1.42e-19!722;CL:0000144!1.95e-10!625;CL:0000223!1.44e-08!59;CL:0002076!6.32e-08!43;CL:0002371!4.42e-07!591;CL:1000449!5.32e-07!16;CL:1000497!9.05e-07!18;CL:0002518!9.05e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.26e-07;15!CL:1000497;3.09e-07;17!CL:0002518;3.09e-07;17!CL:0002076;7.27e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.77e-26,253;CL:0000223,3.21e-09,58;CL:0002076,1.13e-08,42;CL:1000449,1.28e-07,15;CL:1000497,2.60e-07,17;CL:0002518,2.60e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.30e-17!106;DOID:0050687!1.67e-16!143;DOID:162!1.28e-14!235;DOID:14566!4.62e-13!239;DOID:299!3.33e-07!25 | |ontology_enrichment_disease=DOID:305!3.30e-17!106;DOID:0050687!1.67e-16!143;DOID:162!1.28e-14!235;DOID:14566!4.62e-13!239;DOID:299!3.33e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;3.94e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.30e-17,106;DOID:0050687,1.67e-16,143;DOID:162,1.28e-14,235;DOID:14566,4.62e-13,239;DOID:299,3.33e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004211!5.32e-07!16;UBERON:0001285!5.32e-07!16;UBERON:0007684!5.32e-07!16;UBERON:0003220!5.32e-07!16;UBERON:0004208!5.32e-07!16 | |ontology_enrichment_uberon=UBERON:0004211!5.32e-07!16;UBERON:0001285!5.32e-07!16;UBERON:0007684!5.32e-07!16;UBERON:0003220!5.32e-07!16;UBERON:0004208!5.32e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.26e-07;15!UBERON:0004819;1.26e-07;15!UBERON:0001285;1.26e-07;15!UBERON:0007684;1.26e-07;15!UBERON:0006554;2.26e-07;30!UBERON:0001008;2.26e-07;30!UBERON:0005911;4.44e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,5.00e-08,47;UBERON:0004211,1.28e-07,15;UBERON:0009773,1.28e-07,15;UBERON:0001231,1.28e-07,15;UBERON:0001285,1.28e-07,15;UBERON:0007684,1.28e-07,15;UBERON:0004208,1.28e-07,15;UBERON:0001008,2.25e-07,48;UBERON:0006555,9.23e-07,16;UBERON:0004819,9.23e-07,16 | |||
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| ||
|short_description=p1@RCE1 | |short_description=p1@RCE1 | ||
}} | }} |
Latest revision as of 16:00, 19 September 2015
Short description: | p1@RCE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524506, ENST00000524849_5end |
EntrezGene: | RCE1 |
HGNC: | 13721 |
UniProt: | E9PI08E9PPV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.77e-26 | 253 |
endodermal cell | 3.21e-09 | 58 |
endo-epithelial cell | 1.13e-08 | 42 |
epithelial cell of nephron | 1.28e-07 | 15 |
kidney cell | 2.60e-07 | 17 |
kidney epithelial cell | 2.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 5.00e-08 | 47 |
nephron epithelium | 1.28e-07 | 15 |
renal tubule | 1.28e-07 | 15 |
nephron tubule | 1.28e-07 | 15 |
nephron | 1.28e-07 | 15 |
uriniferous tubule | 1.28e-07 | 15 |
nephrogenic mesenchyme | 1.28e-07 | 15 |
renal system | 2.25e-07 | 48 |
excretory tube | 9.23e-07 | 16 |
kidney epithelium | 9.23e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.30e-17 | 106 |
cell type cancer | 1.67e-16 | 143 |
cancer | 1.28e-14 | 235 |
disease of cellular proliferation | 4.62e-13 | 239 |
adenocarcinoma | 3.33e-07 | 25 |