FFCP PHASE1:Hg19::chr5:108745578..108745586,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9867 | |EntrezGene=9867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17481 | |HGNC=17481 | ||
|TSSclassifier=strong | |||
|UniProt=O43164 | |UniProt=O43164 | ||
|association_with_transcript=88bp_to_NM_014819,uc003kos.3_5end | |association_with_transcript=88bp_to_NM_014819,uc003kos.3_5end | ||
|cluster_id=chr5:108745578..108745586,- | |||
|description=CAGE_peak_4_at_PJA2_5end | |description=CAGE_peak_4_at_PJA2_5end | ||
|id=chr5:108745578..108745586,- | |id=chr5:108745578..108745586,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-30!115;UBERON:0001017!1.56e-15!82;UBERON:0005743!3.68e-14!86;UBERON:0001049!7.28e-14!57;UBERON:0005068!7.28e-14!57;UBERON:0006241!7.28e-14!57;UBERON:0007135!7.28e-14!57;UBERON:0000955!2.92e-13!69;UBERON:0006238!2.92e-13!69;UBERON:0000073!5.65e-13!94;UBERON:0001016!5.65e-13!94;UBERON:0002780!8.53e-13!41;UBERON:0001890!8.53e-13!41;UBERON:0006240!8.53e-13!41;UBERON:0003080!1.14e-12!42;UBERON:0002616!1.22e-12!59;UBERON:0001893!3.78e-11!34;UBERON:0002020!8.51e-11!34;UBERON:0003528!8.51e-11!34;UBERON:0001869!1.24e-10!32;UBERON:0002791!1.27e-10!33;UBERON:0002619!1.77e-07!22;UBERON:0000956!2.67e-07!25;UBERON:0000203!2.67e-07!25;UBERON:0002346!6.70e-07!90;UBERON:0003075!7.60e-07!86;UBERON:0007284!7.60e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.43e-30!115;UBERON:0001017!1.56e-15!82;UBERON:0005743!3.68e-14!86;UBERON:0001049!7.28e-14!57;UBERON:0005068!7.28e-14!57;UBERON:0006241!7.28e-14!57;UBERON:0007135!7.28e-14!57;UBERON:0000955!2.92e-13!69;UBERON:0006238!2.92e-13!69;UBERON:0000073!5.65e-13!94;UBERON:0001016!5.65e-13!94;UBERON:0002780!8.53e-13!41;UBERON:0001890!8.53e-13!41;UBERON:0006240!8.53e-13!41;UBERON:0003080!1.14e-12!42;UBERON:0002616!1.22e-12!59;UBERON:0001893!3.78e-11!34;UBERON:0002020!8.51e-11!34;UBERON:0003528!8.51e-11!34;UBERON:0001869!1.24e-10!32;UBERON:0002791!1.27e-10!33;UBERON:0002619!1.77e-07!22;UBERON:0000956!2.67e-07!25;UBERON:0000203!2.67e-07!25;UBERON:0002346!6.70e-07!90;UBERON:0003075!7.60e-07!86;UBERON:0007284!7.60e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.72e-10;32!UBERON:0002791;2.75e-10;32!UBERON:0001893;3.88e-10;34!UBERON:0002780;3.89e-10;41!UBERON:0001890;3.89e-10;41!UBERON:0003528;7.78e-10;34!UBERON:0002020;7.78e-10;34!UBERON:0007023;6.45e-09;114!UBERON:0000073;1.61e-08;53!UBERON:0002616;1.61e-08;53!UBERON:0001017;3.71e-08;75!UBERON:0002619;1.25e-07;22!UBERON:0000956;1.26e-07;25!UBERON:0000203;1.26e-07;25!UBERON:0000955;6.95e-07;68!UBERON:0001950;8.92e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.14e-32,114;UBERON:0001017,1.44e-16,81;UBERON:0001049,3.72e-15,56;UBERON:0005068,3.72e-15,56;UBERON:0006241,3.72e-15,56;UBERON:0007135,3.72e-15,56;UBERON:0001016,4.70e-15,89;UBERON:0000955,3.15e-14,68;UBERON:0006238,3.15e-14,68;UBERON:0000073,5.35e-14,53;UBERON:0002616,5.35e-14,53;UBERON:0002780,1.29e-13,41;UBERON:0001890,1.29e-13,41;UBERON:0003080,1.29e-13,41;UBERON:0006240,1.29e-13,41;UBERON:0001893,7.56e-12,34;UBERON:0003528,1.81e-11,34;UBERON:0002020,1.81e-11,34;UBERON:0001869,2.71e-11,32;UBERON:0002791,4.59e-11,32;UBERON:0002346,1.46e-08,86;UBERON:0003075,1.57e-08,82;UBERON:0007284,1.57e-08,82;UBERON:0002619,6.52e-08,22;UBERON:0000956,1.02e-07,25;UBERON:0000203,1.02e-07,25;UBERON:0001950,5.80e-07,20 | |||
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| ||
|short_description=p4@PJA2 | |short_description=p4@PJA2 | ||
}} | }} |
Latest revision as of 16:10, 19 September 2015
Short description: | p4@PJA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PJA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 88bp_to_NM_014819, uc003kos.3_5end |
EntrezGene: | PJA2 |
HGNC: | 17481 |
UniProt: | O43164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.14e-32 | 114 |
central nervous system | 1.44e-16 | 81 |
neural tube | 3.72e-15 | 56 |
neural rod | 3.72e-15 | 56 |
future spinal cord | 3.72e-15 | 56 |
neural keel | 3.72e-15 | 56 |
nervous system | 4.70e-15 | 89 |
brain | 3.15e-14 | 68 |
future brain | 3.15e-14 | 68 |
regional part of nervous system | 5.35e-14 | 53 |
regional part of brain | 5.35e-14 | 53 |
regional part of forebrain | 1.29e-13 | 41 |
forebrain | 1.29e-13 | 41 |
anterior neural tube | 1.29e-13 | 41 |
future forebrain | 1.29e-13 | 41 |
telencephalon | 7.56e-12 | 34 |
brain grey matter | 1.81e-11 | 34 |
gray matter | 1.81e-11 | 34 |
cerebral hemisphere | 2.71e-11 | 32 |
regional part of telencephalon | 4.59e-11 | 32 |
neurectoderm | 1.46e-08 | 86 |
neural plate | 1.57e-08 | 82 |
presumptive neural plate | 1.57e-08 | 82 |
regional part of cerebral cortex | 6.52e-08 | 22 |
cerebral cortex | 1.02e-07 | 25 |
pallium | 1.02e-07 | 25 |
neocortex | 5.80e-07 | 20 |