FFCP PHASE1:Hg19::chr3:78719376..78719409,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:78719376..78719409,- to FFCP PHASE1:Hg19::chr3:78719376..78719409,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6091 | |EntrezGene=6091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10249 | |HGNC=10249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495961_5end | |||
|cluster_id=chr3:78719376..78719409,- | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_8_at_ROBO1_5end | |||
|id=chr3:78719376..78719409,- | |||
|ontology_enrichment_celltype=CL:0000047!9.93e-10!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.50e-14;2!CL:0000540;6.54e-10;6!CL:0000404;6.54e-10;6!CL:0002319;9.25e-08;25!CL:0000167;2.16e-07;1!CL:0000164;2.16e-07;1!CL:0000502;2.16e-07;1!CL:0000172;2.16e-07;1!CL:0000173;2.16e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.75e-19,8;CL:0000540,6.54e-10,6;CL:0000031,6.54e-10,6;CL:0000404,6.54e-10,6;CL:0002319,9.20e-08,25;CL:0000167,1.97e-07,1;CL:0000164,1.97e-07,1;CL:0000502,1.97e-07,1;CL:0000172,1.97e-07,1;CL:0000173,1.97e-07,1;CL:0002351,1.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;6.54e-10;6!CL:0002351;2.16e-07;1!UBERON:0006601;3.32e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.16e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.27e-49!82;UBERON:0005743!1.36e-47!86;UBERON:0001049!2.34e-46!57;UBERON:0005068!2.34e-46!57;UBERON:0006241!2.34e-46!57;UBERON:0007135!2.34e-46!57;UBERON:0002780!6.33e-44!41;UBERON:0001890!6.33e-44!41;UBERON:0006240!6.33e-44!41;UBERON:0000073!1.04e-42!94;UBERON:0001016!1.04e-42!94;UBERON:0003080!1.39e-42!42;UBERON:0002616!4.74e-42!59;UBERON:0001893!9.15e-38!34;UBERON:0002020!1.24e-37!34;UBERON:0003528!1.24e-37!34;UBERON:0000955!5.19e-37!69;UBERON:0006238!5.19e-37!69;UBERON:0002791!2.21e-36!33;UBERON:0001869!1.50e-35!32;UBERON:0002346!3.16e-33!90;UBERON:0003075!1.29e-32!86;UBERON:0007284!1.29e-32!86;UBERON:0000956!9.27e-32!25;UBERON:0000203!9.27e-32!25;UBERON:0003056!3.55e-28!61;UBERON:0002619!1.20e-27!22;UBERON:0000924!5.86e-25!173;UBERON:0006601!5.86e-25!173;UBERON:0001950!7.39e-25!20;UBERON:0004121!3.72e-24!169;UBERON:0000033!1.16e-23!123;UBERON:0000153!8.91e-23!129;UBERON:0007811!8.91e-23!129;UBERON:0007023!1.09e-19!115;UBERON:0000025!3.21e-16!194;UBERON:0004111!9.90e-13!241;UBERON:0000477!1.11e-10!286;UBERON:0000483!2.52e-10!309;UBERON:0000119!4.99e-10!312;UBERON:0000200!1.00e-09!6;UBERON:0001871!1.90e-09!7;UBERON:0002021!1.31e-08!5;UBERON:0000349!1.48e-08!5;UBERON:0002298!2.29e-08!8;UBERON:0000481!3.36e-08!347;UBERON:0000475!7.99e-08!365;UBERON:0002420!1.03e-07!9;UBERON:0007245!1.03e-07!9;UBERON:0010009!1.03e-07!9;UBERON:0010011!1.03e-07!9;UBERON:0000454!1.03e-07!9;UBERON:0002308!1.21e-07!9;UBERON:0000125!1.21e-07!9;UBERON:0001894!1.70e-07!7;UBERON:0006222!1.70e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.22e-44;32!UBERON:0000956;1.00e-41;25!UBERON:0000203;1.00e-41;25!UBERON:0002619;8.30e-41;22!UBERON:0002791;3.66e-40;32!UBERON:0003528;1.31e-38;34!UBERON:0002020;1.31e-38;34!UBERON:0001893;1.67e-38;34!UBERON:0001950;3.99e-38;20!UBERON:0002780;3.65e-31;41!UBERON:0001890;3.65e-31;41!UBERON:0000073;7.61e-21;53!UBERON:0002616;7.61e-21;53!UBERON:0001872;4.60e-19;5!UBERON:0001017;1.20e-17;75!UBERON:0001016;1.90e-16;83!UBERON:0000200;1.50e-15;6!UBERON:0000955;2.57e-15;68!UBERON:0002021;1.88e-11;5!UBERON:0001870;1.28e-08;3!UBERON:0001882;2.16e-07;1!UBERON:0002022;2.16e-07;1!UBERON:0005403;2.16e-07;1!UBERON:0002581;4.46e-07;1!UBERON:0007190;4.46e-07;1!UBERON:0000369;8.09e-07;4!UBERON:0002435;8.09e-07;4!UBERON:0000204;8.09e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.35e-48,32;UBERON:0001017,7.03e-47,81;UBERON:0003528,3.78e-45,34;UBERON:0002020,3.78e-45,34;UBERON:0001893,3.89e-45,34;UBERON:0002791,1.28e-42,32;UBERON:0000956,5.19e-42,25;UBERON:0000203,5.19e-42,25;UBERON:0001016,8.84e-42,89;UBERON:0002780,1.10e-41,41;UBERON:0001890,1.10e-41,41;UBERON:0003080,1.10e-41,41;UBERON:0006240,1.10e-41,41;UBERON:0002619,4.23e-41,22;UBERON:0001950,1.98e-38,20;UBERON:0001049,6.12e-37,56;UBERON:0005068,6.12e-37,56;UBERON:0006241,6.12e-37,56;UBERON:0007135,6.12e-37,56;UBERON:0000073,2.79e-35,53;UBERON:0002616,2.79e-35,53;UBERON:0000955,1.29e-32,68;UBERON:0006238,1.29e-32,68;UBERON:0003056,5.14e-27,61;UBERON:0003075,4.70e-24,82;UBERON:0007284,4.70e-24,82;UBERON:0002346,9.36e-23,86;UBERON:0011216,4.62e-21,223;UBERON:0004121,1.40e-19,171;UBERON:0000924,1.40e-19,171;UBERON:0006601,1.40e-19,171;UBERON:0001872,5.57e-19,5;UBERON:0010371,3.91e-18,104;UBERON:0000200,1.34e-15,6;UBERON:0010314,1.95e-13,132;UBERON:0002021,1.30e-11,5;UBERON:0000025,2.77e-11,192;UBERON:0007023,4.31e-11,114;UBERON:0001870,8.69e-09,3;UBERON:0004111,4.20e-08,240;UBERON:0002022,2.37e-07,1;UBERON:0001882,2.52e-07,1;UBERON:0005403,2.52e-07,1;UBERON:0002581,4.60e-07,1;UBERON:0007190,7.40e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,2.57612388417951,0.684372125364421,0.87879847716362,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,28.2045032886934,14.3153839243384,6.18631050222156,6.36561808270525,4.46557126157214,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0.748562161632879,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,1.11321717794222,3.99227596002388,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,1.08536794762867,0,0.110579259931225,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0.468528891450678,0,0,0,0,0,5.81538247097931,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,1.64608069485285,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0,0.0674035438541849,0,0,2.38568906942791,0.817220436669454,0.160753148465019,0,0.415440338029185,0,0,2.18698403968889,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.439656701034247,1.32506888912221,1.0342636508924,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.785270481251171,1.77213635993397,1.70836770862748,0.876336514945499,0.573409195690071,0.554645257684261,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,2.11956442818316,2.8339315265117,0.478901577171454,1.8460472781668,7.05800749420811,0.760729777106397,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,1.2401207790071,1.20490039368423,7.65764732625507,0,0,0.351742488719241,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.475788130837822,1.31545547125698,0,0,0,0.942693539496011,0,1.82631744101899,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0.90356865631168,0.219881033490858,0,0,0,0,0,2.59244201811789,1.17785080268967,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.951880862672806,5.23620828408453,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0,0,1.65833887891756,0.724030971033267,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,2.57612388417951,0.684372125364421,0.87879847716362,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,28.2045032886934,14.3153839243384,6.18631050222156,6.36561808270525,4.46557126157214,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0.748562161632879,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,1.11321717794222,3.99227596002388,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,1.08536794762867,0,0.110579259931225,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0.468528891450678,0,0,0,0,0,5.81538247097931,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,1.64608069485285,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0,0.0674035438541849,0,0,2.38568906942791,0.817220436669454,0.160753148465019,0,0.415440338029185,0,0,2.18698403968889,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.439656701034247,1.32506888912221,1.0342636508924,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.785270481251171,1.77213635993397,1.70836770862748,0.876336514945499,0.573409195690071,0.554645257684261,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,2.11956442818316,2.8339315265117,0.478901577171454,1.8460472781668,7.05800749420811,0.760729777106397,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,1.2401207790071,1.20490039368423,7.65764732625507,0,0,0.351742488719241,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.475788130837822,1.31545547125698,0,0,0,0.942693539496011,0,1.82631744101899,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0.90356865631168,0.219881033490858,0,0,0,0,0,2.59244201811789,1.17785080268967,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.951880862672806,5.23620828408453,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0,0,1.65833887891756,0.724030971033267,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p8@ROBO1 | |||
}} | }} |
Latest revision as of 16:30, 19 September 2015
Short description: | p8@ROBO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ROBO1_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 0bp_to_ENST00000495961_5end |
EntrezGene: | ROBO1 |
HGNC: | 10249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.75e-19 | 8 |
neuron | 6.54e-10 | 6 |
neuroblast | 6.54e-10 | 6 |
electrically signaling cell | 6.54e-10 | 6 |
neural cell | 9.20e-08 | 25 |
peptide hormone secreting cell | 1.97e-07 | 1 |
enteroendocrine cell | 1.97e-07 | 1 |
type D enteroendocrine cell | 1.97e-07 | 1 |
somatostatin secreting cell | 1.97e-07 | 1 |
pancreatic D cell | 1.97e-07 | 1 |
progenitor cell of endocrine pancreas | 1.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.97e-07 | 1 |