FFCP PHASE1:Hg19::chr2:20646824..20646844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388 | |EntrezGene=388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=668 | |HGNC=668 | ||
|TSSclassifier=strong | |||
|UniProt=P62745,B2R692 | |UniProt=P62745,B2R692 | ||
|association_with_transcript=0bp_to_ENST00000272233,NM_004040,uc002rdv.2_5end | |association_with_transcript=0bp_to_ENST00000272233,NM_004040,uc002rdv.2_5end | ||
|cluster_id=chr2:20646824..20646844,+ | |||
|description=CAGE_peak_1_at_RHOB_5end | |description=CAGE_peak_1_at_RHOB_5end | ||
|id=chr2:20646824..20646844,+ | |id=chr2:20646824..20646844,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.63e-10!24;CL:0000115!1.86e-09!35;CL:0000071!4.61e-09!18;CL:0002546!4.61e-09!18;CL:0002078!4.25e-08!44 | |ontology_enrichment_celltype=CL:0002139!1.63e-10!24;CL:0000115!1.86e-09!35;CL:0000071!4.61e-09!18;CL:0002546!4.61e-09!18;CL:0002078!4.25e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.62e-10;24!CL:0000071;4.59e-09;18!CL:0000115;8.61e-08;36 | |ontology_enrichment_celltype_v019=CL:0002139;1.62e-10;24!CL:0000071;4.59e-09;18!CL:0000115;8.61e-08;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.63e-10,24;CL:0000115,3.43e-09,36;CL:0000071,4.61e-09,18;CL:0002546,4.61e-09,18;CL:0002078,6.48e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;4.59e-09;18 | |ontology_enrichment_development_v019=CL:0002546;4.59e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;2.20e-10;34!UBERON:0002020;2.20e-10;34!UBERON:0001893;2.93e-10;34!UBERON:0002791;3.47e-10;32!UBERON:0001869;5.90e-10;32!UBERON:0000073;3.34e-09;53!UBERON:0002616;3.34e-09;53!UBERON:0002780;3.39e-09;41!UBERON:0001890;3.39e-09;41!UBERON:0004638;4.59e-09;18!UBERON:0001986;4.59e-09;18!UBERON:0004852;4.59e-09;18!UBERON:0000956;2.85e-08;25!UBERON:0000203;2.85e-08;25!UBERON:0007023;3.88e-08;114!UBERON:0002619;1.51e-07;22!UBERON:0000487;2.17e-07;22!UBERON:0001017;3.42e-07;75!UBERON:0001950;6.70e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0003528;2.20e-10;34!UBERON:0002020;2.20e-10;34!UBERON:0001893;2.93e-10;34!UBERON:0002791;3.47e-10;32!UBERON:0001869;5.90e-10;32!UBERON:0000073;3.34e-09;53!UBERON:0002616;3.34e-09;53!UBERON:0002780;3.39e-09;41!UBERON:0001890;3.39e-09;41!UBERON:0004638;4.59e-09;18!UBERON:0001986;4.59e-09;18!UBERON:0004852;4.59e-09;18!UBERON:0000956;2.85e-08;25!UBERON:0000203;2.85e-08;25!UBERON:0007023;3.88e-08;114!UBERON:0002619;1.51e-07;22!UBERON:0000487;2.17e-07;22!UBERON:0001017;3.42e-07;75!UBERON:0001950;6.70e-07;20 | ||
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| ||
|short_description=p1@RHOB | |short_description=p1@RHOB | ||
}} | }} |
Latest revision as of 16:50, 19 September 2015
Short description: | p1@RHOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHOB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000272233, NM_004040, uc002rdv.2_5end |
EntrezGene: | RHOB |
HGNC: | 668 |
UniProt: | P62745B2R692 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.63e-10 | 24 |
endothelial cell | 3.43e-09 | 36 |
blood vessel endothelial cell | 4.61e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.61e-09 | 18 |
meso-epithelial cell | 6.48e-08 | 45 |