FFCP PHASE1:Hg19::chr5:110407408..110407415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85480 | |EntrezGene=85480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30743 | |HGNC=30743 | ||
|TSSclassifier=strong | |||
|UniProt=Q969D9 | |UniProt=Q969D9 | ||
|association_with_transcript=18bp_to_ENST00000344895,NM_033035,uc003kpb.2_5end | |association_with_transcript=18bp_to_ENST00000344895,NM_033035,uc003kpb.2_5end | ||
|cluster_id=chr5:110407408..110407415,+ | |||
|coexpression_cluster_id=C1326 | |coexpression_cluster_id=C1326 | ||
|description=CAGE_peak_3_at_TSLP_5end | |description=CAGE_peak_3_at_TSLP_5end | ||
|id=chr5:110407408..110407415,+ | |id=chr5:110407408..110407415,+ | ||
|ontology_enrichment_celltype=CL:0000569!3.04e-14!4;CL:0000011!3.04e-14!4;CL:0002582!4.19e-11!3;CL:0000048!8.70e-10!430;CL:0000723!1.72e-09!436;CL:0002057!2.41e-09!42;CL:0000034!4.13e-09!444;CL:0000860!1.51e-08!45;CL:0000680!2.15e-08!57;CL:0000056!2.15e-08!57;CL:0000355!2.15e-08!57;CL:0002583!2.54e-07!2;CL:0002494!2.76e-07!16;CL:0002595!3.18e-07!5;CL:0000359!3.24e-07!32;CL:0002334!8.95e-07!12 | |ontology_enrichment_celltype=CL:0000569!3.04e-14!4;CL:0000011!3.04e-14!4;CL:0002582!4.19e-11!3;CL:0000048!8.70e-10!430;CL:0000723!1.72e-09!436;CL:0002057!2.41e-09!42;CL:0000034!4.13e-09!444;CL:0000860!1.51e-08!45;CL:0000680!2.15e-08!57;CL:0000056!2.15e-08!57;CL:0000355!2.15e-08!57;CL:0002583!2.54e-07!2;CL:0002494!2.76e-07!16;CL:0002595!3.18e-07!5;CL:0000359!3.24e-07!32;CL:0002334!8.95e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.69e-19;5!CL:0000569;1.26e-11;4!CL:0000860;7.96e-10;33!CL:0002057;7.96e-10;33!CL:0000473;3.77e-07;39!CL:0000234;3.77e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.09e-19,5;CL:0000569,1.55e-11,4;CL:0000011,1.55e-11,4;CL:0000860,1.17e-08,42;CL:0002057,1.17e-08,42;CL:0000473,1.60e-07,48;CL:0000234,1.60e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000011;1.26e-11;4!CL:0002057;8.13e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.69e-10!167;UBERON:0001134!1.21e-07!61;UBERON:0002036!1.21e-07!61;UBERON:0003082!1.21e-07!61;UBERON:0004290!2.33e-07!70;UBERON:0002385!2.63e-07!63;UBERON:0001015!2.63e-07!63;UBERON:0000383!2.63e-07!63;UBERON:0003834!3.18e-07!5;UBERON:0001533!3.18e-07!5;UBERON:0003081!7.04e-07!216 | |ontology_enrichment_uberon=UBERON:0002204!8.69e-10!167;UBERON:0001134!1.21e-07!61;UBERON:0002036!1.21e-07!61;UBERON:0003082!1.21e-07!61;UBERON:0004290!2.33e-07!70;UBERON:0002385!2.63e-07!63;UBERON:0001015!2.63e-07!63;UBERON:0000383!2.63e-07!63;UBERON:0003834!3.18e-07!5;UBERON:0001533!3.18e-07!5;UBERON:0003081!7.04e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.69e-19;5!UBERON:0001533;1.69e-19;5!UBERON:0003513;4.15e-14;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.09e-19,5;UBERON:0001533,1.09e-19,5;UBERON:0003513,3.04e-14,7;UBERON:0003081,4.81e-08,203 | |||
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| ||
|short_description=p3@TSLP | |short_description=p3@TSLP | ||
}} | }} |
Latest revision as of 16:58, 19 September 2015
Short description: | p3@TSLP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSLP_5end |
Coexpression cluster: | C1326_mesenchymal_CD14_Fibroblast_Smooth_Preadipocyte_Endothelial_Renal |
Association with transcript: | 18bp_to_ENST00000344895, NM_033035, uc003kpb.2_5end |
EntrezGene: | TSLP |
HGNC: | 30743 |
UniProt: | Q969D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.09e-19 | 5 |
cardiac mesenchymal cell | 1.55e-11 | 4 |
migratory trunk neural crest cell | 1.55e-11 | 4 |
classical monocyte | 1.17e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-08 | 42 |
defensive cell | 1.60e-07 | 48 |
phagocyte | 1.60e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.09e-19 | 5 |
subclavian artery | 1.09e-19 | 5 |
trunk blood vessel | 3.04e-14 | 7 |
lateral plate mesoderm | 4.81e-08 | 203 |