FFCP PHASE1:Hg19::chr2:206547027..206547034,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8005 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PF66,O60462,F5H1G4,F5H2X3,Q7LBX6,Q7Z3T9,Q9H2E2,Q7LBX7 | ||
|association_with_transcript=-189bp_to_ENST00000355117,ENST00000360409,ENST00000540178,ENST00000540841,NM_003872,NM_018534,NM_201264,NM_201266,NM_201267,NM_201279,uc002vat.2,uc002vau.2,uc002vav.2,uc002vaw.2,uc002vax.2,uc002vay.2_5end | |association_with_transcript=-189bp_to_ENST00000355117,ENST00000360409,ENST00000540178,ENST00000540841,NM_003872,NM_018534,NM_201264,NM_201266,NM_201267,NM_201279,uc002vat.2,uc002vau.2,uc002vav.2,uc002vaw.2,uc002vax.2,uc002vay.2_5end | ||
|cluster_id=chr2:206547027..206547034,+ | |cluster_id=chr2:206547027..206547034,+ |
Latest revision as of 17:00, 19 September 2015
Short description: | p9@NRP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NRP2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -189bp_to_ENST00000355117, ENST00000360409, ENST00000540178, ENST00000540841, NM_003872, NM_018534, NM_201264, NM_201266, NM_201267, NM_201279, uc002vat.2, uc002vau.2, uc002vav.2, uc002vaw.2, uc002vax.2, uc002vay.2_5end |
EntrezGene: | NRP2 |
HGNC: | 8005 |
UniProt: | E9PF66O60462F5H1G4F5H2X3Q7LBX6Q7Z3T9Q9H2E2Q7LBX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@NRP2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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macrophage | 1.43e-13 | 6 |
endothelial cell of sinusoid | 1.14e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.14e-10 | 2 |
lymphangioblast | 1.73e-07 | 6 |
endothelial cell of lymphatic vessel | 1.73e-07 | 6 |
vascular lymphangioblast | 1.73e-07 | 6 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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hepatic sinusoid | 1.14e-10 | 2 |
abdomen blood vessel | 1.14e-10 | 2 |
sinusoid | 1.14e-10 | 2 |
abdominal segment blood vessel | 1.14e-10 | 2 |
right ovary | 1.94e-09 | 5 |
liver parenchyma | 2.19e-07 | 3 |
liver lobule | 2.19e-07 | 3 |
hepatic duct | 2.19e-07 | 3 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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ovarian cancer | 6.53e-12 | 14 |
female reproductive organ cancer | 6.29e-08 | 27 |
reproductive organ cancer | 2.57e-07 | 29 |
Showing 1 to 3 of 3 entries