FFCP PHASE1:Hg19::chr10:86184919..86184940,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54462 | |EntrezGene=54462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29197 | |HGNC=29197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493409_5end | |association_with_transcript=0bp_to_ENST00000493409_5end | ||
|cluster_id=chr10:86184919..86184940,+ | |||
|description=CAGE_peak_7_at_FAM190B_5end | |description=CAGE_peak_7_at_FAM190B_5end | ||
|id=chr10:86184919..86184940,+ | |id=chr10:86184919..86184940,+ | ||
|ontology_enrichment_celltype=CL:0000147!1.97e-07!14 | |ontology_enrichment_celltype=CL:0000147!1.97e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000147;6.02e-10;14!CL:0000138;2.03e-09;6!CL:0000148;2.41e-09;10!CL:0002580;3.24e-08;3!CL:0002581;4.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,6.57e-10,14;CL:0000058,2.07e-09,6;CL:0000138,2.07e-09,6;CL:0000148,2.72e-09,10;CL:0000541,2.72e-09,10;CL:0002580,1.73e-08,3;CL:0002581,3.57e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;8.83e-13;2!DOID:3371;3.17e-07;1!DOID:4549;3.17e-07;1!DOID:5861;3.17e-07;1!DOID:6496;3.17e-07;1!DOID:6193;8.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.86e-13,2;DOID:3371,2.99e-07,1;DOID:4549,2.99e-07,1;DOID:5861,2.99e-07,1;DOID:6496,2.99e-07,1;DOID:6193,8.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.54e-12!115;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0003075!1.23e-09!86;UBERON:0007284!1.23e-09!86;UBERON:0005743!7.06e-09!86;UBERON:0004121!9.73e-09!169;UBERON:0002346!9.90e-09!90;UBERON:0000924!3.50e-08!173;UBERON:0006601!3.50e-08!173;UBERON:0000475!2.46e-07!365;UBERON:0000073!4.24e-07!94;UBERON:0001016!4.24e-07!94;UBERON:0001017!6.67e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!7.54e-12!115;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0003075!1.23e-09!86;UBERON:0007284!1.23e-09!86;UBERON:0005743!7.06e-09!86;UBERON:0004121!9.73e-09!169;UBERON:0002346!9.90e-09!90;UBERON:0000924!3.50e-08!173;UBERON:0006601!3.50e-08!173;UBERON:0000475!2.46e-07!365;UBERON:0000073!4.24e-07!94;UBERON:0001016!4.24e-07!94;UBERON:0001017!6.67e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;4.13e-07;1!UBERON:0009661;4.13e-07;1!UBERON:0002950;4.13e-07;1!UBERON:0001891;4.13e-07;1!UBERON:0007029;8.97e-07;1!UBERON:0004913;8.97e-07;1!UBERON:0003703;8.97e-07;1!UBERON:0001174;8.97e-07;1!UBERON:0004914;8.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.78e-07,1;UBERON:0009661,3.78e-07,1;UBERON:0002950,3.78e-07,1;UBERON:0001891,3.78e-07,1;UBERON:0009616,3.78e-07,1;UBERON:0010286,3.78e-07,1;UBERON:0007029,7.15e-07,1 | |||
|phase1_expression=1.45342703416445,0.214100523890983,0.422863212287913,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,3.1811437882044,4.37971383272372,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.487185025805993,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0.288239906833923,0,0.825472625798197,0.381988425558278,1.17217447210047,0,5.34702962057282,6.00686115687835,1.14330573052231,0,0,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,0.902838299183157,2.27407504055985,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,1.73675465473144,1.99500565274481,0.841980283299221,0.640695746278505,0,0.160853921143607,2.96836132889982,0,0,0,0.519254429183621,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,1.30151357865721,0,1.19040304263846,1.07262349896764,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.95497793895076,0,1.22864280839693,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0,1.61394733071642,0.0897576444097721,0.325942115766024,0,0.641183153813036,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0.330991955875499,0,0,0,1.8027707491708,0,0,0.435296032902013,0.17472666824203,1.37588825977293,0,0,0,0.0969890164884194,3.53024506766001,1.12990370390266,0,0,0.126621591911757,0.195551382734803,0.561111741760736,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.798716001995964,0,0,0.335917362433631,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,1.14681839138014,0.776503360757966,0.683060432355218,0,0,2.42638588066636,5.13837600380941,0,0,0,0.298509605773748,0,0,0,0.50313580350515,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,2.40016658797892,0,0.673498977531838,0,0,7.29101410674747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.321146125482298,0,0.638535436228605,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0.762764190934334,0,0.994581110581374,0.225630985047772,0,0,0,0,1.03499260351932,0.135075169236789,0,0.206686796501184,0,0,0,0.496211178389294,0,0,1.07140367175657,0,0,1.82129753081038,0.354809480650555,0,0.171488009437418,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,1.57248397188644,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0.883352102537187,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.981542335574726,0.891139200981258,3.3812458206672,0.169927114687817,0,0,0,0,0,0.240724100067505,0.730336388246517,0,2.58011249672612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.620597975171371,0.213233981900981,0.476128862927481,0,0.124149428591716,0.224263725161227,4.45530107947154,1.0105859447911,0.217716747896961,0,0.134704106029175,0.573777643141411,0.332660356546013,0,0.213454691755431,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |phase1_expression=1.45342703416445,0.214100523890983,0.422863212287913,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,3.1811437882044,4.37971383272372,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.487185025805993,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0.288239906833923,0,0.825472625798197,0.381988425558278,1.17217447210047,0,5.34702962057282,6.00686115687835,1.14330573052231,0,0,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,0.902838299183157,2.27407504055985,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,1.73675465473144,1.99500565274481,0.841980283299221,0.640695746278505,0,0.160853921143607,2.96836132889982,0,0,0,0.519254429183621,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,1.30151357865721,0,1.19040304263846,1.07262349896764,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.95497793895076,0,1.22864280839693,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0,1.61394733071642,0.0897576444097721,0.325942115766024,0,0.641183153813036,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0.330991955875499,0,0,0,1.8027707491708,0,0,0.435296032902013,0.17472666824203,1.37588825977293,0,0,0,0.0969890164884194,3.53024506766001,1.12990370390266,0,0,0.126621591911757,0.195551382734803,0.561111741760736,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.798716001995964,0,0,0.335917362433631,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,1.14681839138014,0.776503360757966,0.683060432355218,0,0,2.42638588066636,5.13837600380941,0,0,0,0.298509605773748,0,0,0,0.50313580350515,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,2.40016658797892,0,0.673498977531838,0,0,7.29101410674747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.321146125482298,0,0.638535436228605,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0.762764190934334,0,0.994581110581374,0.225630985047772,0,0,0,0,1.03499260351932,0.135075169236789,0,0.206686796501184,0,0,0,0.496211178389294,0,0,1.07140367175657,0,0,1.82129753081038,0.354809480650555,0,0.171488009437418,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,1.57248397188644,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0.883352102537187,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.981542335574726,0.891139200981258,3.3812458206672,0.169927114687817,0,0,0,0,0,0.240724100067505,0.730336388246517,0,2.58011249672612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.620597975171371,0.213233981900981,0.476128862927481,0,0.124149428591716,0.224263725161227,4.45530107947154,1.0105859447911,0.217716747896961,0,0.134704106029175,0.573777643141411,0.332660356546013,0,0.213454691755431,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p7@FAM190B | |short_description=p7@FAM190B | ||
}} | }} |
Latest revision as of 17:09, 19 September 2015
Short description: | p7@FAM190B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM190B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000493409_5end |
EntrezGene: | FAM190B |
HGNC: | 29197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 6.57e-10 | 14 |
chondroblast | 2.07e-09 | 6 |
chondrocyte | 2.07e-09 | 6 |
melanocyte | 2.72e-09 | 10 |
melanoblast | 2.72e-09 | 10 |
preadipocyte of the breast | 1.73e-08 | 3 |
perirenal preadipocyte | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.78e-07 | 1 |
midbrain nucleus | 3.78e-07 | 1 |
regional part of midbrain | 3.78e-07 | 1 |
midbrain | 3.78e-07 | 1 |
presumptive midbrain | 3.78e-07 | 1 |
midbrain neural tube | 3.78e-07 | 1 |
surface | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.86e-13 | 2 |
chondrosarcoma | 2.99e-07 | 1 |
extraosseous chondrosarcoma | 2.99e-07 | 1 |
myxoid chondrosarcoma | 2.99e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.99e-07 | 1 |
epithelioid sarcoma | 8.02e-07 | 1 |