FFCP PHASE1:Hg19::chr10:88516396..88516426,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=657 | |EntrezGene=657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1076 | |HGNC=1076 | ||
|TSSclassifier=strong | |||
|UniProt=P36894 | |UniProt=P36894 | ||
|association_with_transcript=0bp_to_ENST00000224764,ENST00000372037,NM_004329,uc001kdy.2_5end | |association_with_transcript=0bp_to_ENST00000224764,ENST00000372037,NM_004329,uc001kdy.2_5end | ||
|cluster_id=chr10:88516396..88516426,+ | |||
|description=CAGE_peak_2_at_BMPR1A_5end | |description=CAGE_peak_2_at_BMPR1A_5end | ||
|id=chr10:88516396..88516426,+ | |id=chr10:88516396..88516426,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.96e-08!180;CL:0000133!1.01e-07!59;CL:0000047!7.07e-07!8 | |ontology_enrichment_celltype=CL:0000055!1.96e-08!180;CL:0000133!1.01e-07!59;CL:0000047!7.07e-07!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.31e-08,8;CL:0000133,1.08e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.46e-23!86;UBERON:0001017!3.08e-22!82;UBERON:0000073!1.29e-21!94;UBERON:0001016!1.29e-21!94;UBERON:0000924!3.21e-17!173;UBERON:0006601!3.21e-17!173;UBERON:0004121!1.04e-16!169;UBERON:0002346!2.02e-16!90;UBERON:0003075!5.35e-16!86;UBERON:0007284!5.35e-16!86;UBERON:0000955!2.50e-15!69;UBERON:0006238!2.50e-15!69;UBERON:0000033!8.23e-15!123;UBERON:0001049!9.52e-15!57;UBERON:0005068!9.52e-15!57;UBERON:0006241!9.52e-15!57;UBERON:0007135!9.52e-15!57;UBERON:0002616!8.49e-14!59;UBERON:0000153!9.97e-14!129;UBERON:0007811!9.97e-14!129;UBERON:0002780!1.20e-13!41;UBERON:0001890!1.20e-13!41;UBERON:0006240!1.20e-13!41;UBERON:0003080!8.64e-13!42;UBERON:0003056!2.31e-12!61;UBERON:0001893!1.01e-11!34;UBERON:0002020!1.03e-11!34;UBERON:0003528!1.03e-11!34;UBERON:0002791!2.08e-11!33;UBERON:0001869!3.09e-11!32;UBERON:0000475!8.56e-11!365;UBERON:0007023!2.58e-10!115;UBERON:0000481!4.30e-10!347;UBERON:0000468!7.62e-10!659;UBERON:0000062!1.16e-08!511;UBERON:0000956!1.96e-08!25;UBERON:0000203!1.96e-08!25;UBERON:0000922!6.01e-08!612;UBERON:0002619!6.42e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.22e-11;41!UBERON:0001890;2.22e-11;41!UBERON:0001893;6.48e-11;34!UBERON:0002791;8.70e-11;32!UBERON:0003528;9.09e-11;34!UBERON:0002020;9.09e-11;34!UBERON:0001869;1.03e-10;32!UBERON:0000073;4.52e-09;53!UBERON:0002616;4.52e-09;53!UBERON:0000956;7.98e-09;25!UBERON:0000203;7.98e-09;25!UBERON:0001017;1.83e-08;75!UBERON:0001016;9.41e-08;83!UBERON:0000955;3.64e-07;68!UBERON:0002619;5.26e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-26,81;UBERON:0001016,4.65e-24,89;UBERON:0000955,8.99e-18,68;UBERON:0006238,8.99e-18,68;UBERON:0001049,2.12e-17,56;UBERON:0005068,2.12e-17,56;UBERON:0006241,2.12e-17,56;UBERON:0007135,2.12e-17,56;UBERON:0003075,2.42e-17,82;UBERON:0007284,2.42e-17,82;UBERON:0002346,3.42e-17,86;UBERON:0004121,1.86e-16,171;UBERON:0000924,1.86e-16,171;UBERON:0006601,1.86e-16,171;UBERON:0000073,1.55e-15,53;UBERON:0002616,1.55e-15,53;UBERON:0002780,4.94e-15,41;UBERON:0001890,4.94e-15,41;UBERON:0003080,4.94e-15,41;UBERON:0006240,4.94e-15,41;UBERON:0010314,2.48e-14,132;UBERON:0003056,6.40e-14,61;UBERON:0011216,5.65e-13,223;UBERON:0001893,1.24e-12,34;UBERON:0003528,1.26e-12,34;UBERON:0002020,1.26e-12,34;UBERON:0001869,5.04e-12,32;UBERON:0002791,1.17e-11,32;UBERON:0007023,2.67e-11,114;UBERON:0010371,7.45e-11,104;UBERON:0000956,1.26e-08,25;UBERON:0000203,1.26e-08,25;UBERON:0002619,7.71e-07,22 | |||
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|phase1_expression=1.99846217197612,1.07050261945492,2.96004248601539,2.00146596706261,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0,0.873765488520689,0,0.866364470720326,0.994192127183747,1.34465029290355,0,2.19093027116212,0,0.861847406537515,0,1.88072832886853,3.72106783270374,4.65373045247806,3.13856598987007,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0.739508020333575,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,2.17366355134002,0,1.50401373190767,2.02785126545153,0.795285947051099,0,2.07976597760949,1.55210578223795,1.93236528524877,1.83370705696798,0.364295288292542,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,2.48485975847659,1.51956613997496,2.64818361626438,2.0078563452417,0.709336764396714,0.560677600142307,1.06748995729705,1.2333377420858,2.17847724779836,0.942974704487816,1.79808093424805,0.454072282934794,1.72852777344,0.468642863667593,0,0,0.448346041655403,0.23486899728753,0.809364721840658,0.280901613404497,0.61246251376468,0.61417158655884,1.75653827998801,1.18800285728205,1.48360157567134,0,0,1.85169725349473,1.00094815897571,0.831192346452549,2.63386572528503,0.919463387397059,1.80285670687916,1.70148274740032,1.25572744982203,1.2813443329114,1.27159140695737,1.50045548042201,1.23663035086127,1.28820270022815,0.37223371266318,3.54430297706659,0.584622030967192,1.26216887122057,1.01254888506529,2.10139873864455,1.06502877754984,1.5112814734146,0.508681776931463,0.386521706326594,0.272746120590835,0,10.1238176087564,12.1927386855766,8.8307396580834,7.56725701612204,9.08355063152262,7.2995471815166,0,0,0,1.39310378409594,0,0.946454400318751,0.337169380156203,0.723033089650446,0.772057809126758,0.871517776369625,0.237270619111097,0.674156540800822,1.17732879075208,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,2.58275720940538,1.02940686179115,0.439001141634502,0,0.603173834469785,0.370353780634118,0.325808305310325,1.03993478527958,0,2.20267769452646,2.34817388471643,0,0,0,0,0.858486162094873,0,0,0,0,1.17587489739202,0.141775097242386,0.626909658919938,0,0,6.40462209264727,10.0375214775078,4.35389042635621,3.60299883542404,5.42842463733434,1.07946420296687,1.90994212779139,0,1.71072446022705,0.514137463516618,1.8020583470635,1.71495859578347,1.12131084345361,1.74384027533312,1.68678057388185,1.16344544182,0,0.845302752556,2.39344304926383,0,0.514414748524284,0,0.266422179016099,2.7165818795048,0,0,0.325736184293735,1.42156779497018,0,0.904318131178758,0.871533458600294,1.3996218765488,0,0,0,2.87549826589899,2.29723871668228,2.85273810081437,0.868687840005475,0.410952645100767,1.61154866915906,0,0,0,0,7.87693335089637,6.50699269288109,6.18631050222156,5.36052049069916,5.74144876487847,0,0,0,1.59498939234882,0.500170521059677,1.62759014219841,0.207970861530807,1.07057393278297,1.26161932027148,1.87426263988341,0.601892199455438,0,2.0694614258501,0,1.29058417979192,0.60818530127658,0.783204629850962,0.343143423810856,0,0,0,0,0,0.604780586659361,1.73675465473144,2.30192959932094,0.841980283299221,2.81906128362542,1.53512174720011,1.44768529029247,1.48418066444991,0.308419387605311,0.710246901252508,0.739144404124282,0.519254429183621,0.697262270759755,2.05461064305758,0,0.644566922551274,1.14814448164607,1.63882051206045,1.04899531967539,0,0.770153371044148,0,0,1.26661954671451,0,0,0.647747748306418,0,0.812839312631559,1.00337954770971,0,0,0.447749509444357,0,0,0.769350375349168,2.62411716559765,1.62689197332152,1.64865618636356,1.46511143709349,1.40266149865,0,0,1.6068392984416,1.16004861950546,0.308097234229289,0.460511024178389,0.413509717453592,1.07420244868274,0.870100163485371,0.681813019328807,1.78064071293475,0.661139661443912,0.384380134730212,1.65896526242959,0.910420027699949,0,1.5740617341532,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,1.00187420719394,1.86079184679834,1.2655176988749,1.5250415513906,0.255897791311334,0,0.636406495851874,0.78494864019923,0.899362287916574,0.823611089208164,0.942499218765491,0.202182481573316,1.58510321173008,0.421258456238981,0,1.46228093778771,1.05650146756755,0.818999468447914,0.989838023675989,0,0.551365343546124,0,0,1.15755106853338,1.31178950409327,1.21746226177622,0.30982349809975,0,0.717056761020258,1.08073945114433,0,1.06428319221179,1.68886108238131,0,0,0.349934720244983,0.288666338176536,0,0,1.22386941009813,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,2.88424992044177,6.73735898684351,0.735120647943095,0.371606350251437,0,0,1.91311527274587,0,0,0,0,0,0,0,0,0.677167111206413,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0,0,1.6227340708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| ||
|short_description=p2@BMPR1A | |short_description=p2@BMPR1A | ||
}} | }} |
Latest revision as of 18:03, 19 September 2015
Short description: | p2@BMPR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BMPR1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000224764, ENST00000372037, NM_004329, uc001kdy.2_5end |
EntrezGene: | BMPR1A |
HGNC: | 1076 |
UniProt: | P36894 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.31e-08 | 8 |
neurectodermal cell | 1.08e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.64e-26 | 81 |
nervous system | 4.65e-24 | 89 |
brain | 8.99e-18 | 68 |
future brain | 8.99e-18 | 68 |
neural tube | 2.12e-17 | 56 |
neural rod | 2.12e-17 | 56 |
future spinal cord | 2.12e-17 | 56 |
neural keel | 2.12e-17 | 56 |
neural plate | 2.42e-17 | 82 |
presumptive neural plate | 2.42e-17 | 82 |
neurectoderm | 3.42e-17 | 86 |
ectoderm-derived structure | 1.86e-16 | 171 |
ectoderm | 1.86e-16 | 171 |
presumptive ectoderm | 1.86e-16 | 171 |
regional part of nervous system | 1.55e-15 | 53 |
regional part of brain | 1.55e-15 | 53 |
regional part of forebrain | 4.94e-15 | 41 |
forebrain | 4.94e-15 | 41 |
anterior neural tube | 4.94e-15 | 41 |
future forebrain | 4.94e-15 | 41 |
structure with developmental contribution from neural crest | 2.48e-14 | 132 |
pre-chordal neural plate | 6.40e-14 | 61 |
organ system subdivision | 5.65e-13 | 223 |
telencephalon | 1.24e-12 | 34 |
brain grey matter | 1.26e-12 | 34 |
gray matter | 1.26e-12 | 34 |
cerebral hemisphere | 5.04e-12 | 32 |
regional part of telencephalon | 1.17e-11 | 32 |
adult organism | 2.67e-11 | 114 |
ecto-epithelium | 7.45e-11 | 104 |
cerebral cortex | 1.26e-08 | 25 |
pallium | 1.26e-08 | 25 |
regional part of cerebral cortex | 7.71e-07 | 22 |