FFCP PHASE1:Hg19::chr1:201857980..201857991,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:201857980..201857991,+ to FFCP PHASE1:Hg19::chr1:201857980..201857991,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149345 | |EntrezGene=149345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27139 | |HGNC=27139 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_uc001gxa.2_5end | |||
|cluster_id=chr1:201857980..201857991,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SHISA4_5end | |||
|id=chr1:201857980..201857991,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.25e-17!180;CL:0000183!5.63e-10!59;CL:0000680!2.73e-08!57;CL:0000056!2.73e-08!57;CL:0000355!2.73e-08!57;CL:0000393!3.03e-08!60;CL:0000211!3.03e-08!60;CL:0000187!4.19e-08!54;CL:0000192!4.53e-08!42;CL:0000514!4.53e-08!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.73e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.05e-29!94;UBERON:0001016!2.05e-29!94;UBERON:0005743!5.91e-29!86;UBERON:0001017!7.46e-29!82;UBERON:0000955!7.07e-27!69;UBERON:0006238!7.07e-27!69;UBERON:0001049!4.26e-26!57;UBERON:0005068!4.26e-26!57;UBERON:0006241!4.26e-26!57;UBERON:0007135!4.26e-26!57;UBERON:0002616!1.48e-25!59;UBERON:0003075!4.49e-24!86;UBERON:0007284!4.49e-24!86;UBERON:0002346!1.36e-22!90;UBERON:0004121!1.50e-21!169;UBERON:0000924!9.13e-21!173;UBERON:0006601!9.13e-21!173;UBERON:0002780!1.33e-20!41;UBERON:0001890!1.33e-20!41;UBERON:0006240!1.33e-20!41;UBERON:0003080!1.36e-20!42;UBERON:0000475!1.66e-20!365;UBERON:0000033!4.10e-20!123;UBERON:0000153!8.08e-19!129;UBERON:0007811!8.08e-19!129;UBERON:0001893!1.51e-18!34;UBERON:0002020!2.28e-18!34;UBERON:0003528!2.28e-18!34;UBERON:0002791!7.39e-18!33;UBERON:0001869!1.08e-17!32;UBERON:0000483!1.47e-17!309;UBERON:0000119!1.65e-17!312;UBERON:0003056!2.50e-17!61;UBERON:0007023!4.41e-17!115;UBERON:0000025!1.93e-16!194;UBERON:0000477!3.33e-15!286;UBERON:0004111!1.95e-14!241;UBERON:0000956!2.34e-14!25;UBERON:0000203!2.34e-14!25;UBERON:0000481!3.27e-14!347;UBERON:0000468!6.22e-14!659;UBERON:0002619!2.82e-13!22;UBERON:0001950!5.88e-12!20;UBERON:0000467!1.87e-10!625;UBERON:0002050!2.57e-10!605;UBERON:0005423!2.57e-10!605;UBERON:0000923!2.94e-10!604;UBERON:0005291!2.94e-10!604;UBERON:0006598!2.94e-10!604;UBERON:0002532!2.94e-10!604;UBERON:0000480!2.98e-10!626;UBERON:0000922!7.41e-10!612;UBERON:0000914!9.10e-10!83;UBERON:0002329!9.10e-10!83;UBERON:0003077!9.10e-10!83;UBERON:0003059!9.10e-10!83;UBERON:0007282!9.10e-10!83;UBERON:0009618!9.10e-10!83;UBERON:0007285!9.10e-10!83;UBERON:0000064!7.46e-09!219;UBERON:0001134!2.24e-08!61;UBERON:0002036!2.24e-08!61;UBERON:0003082!2.24e-08!61;UBERON:0002385!3.31e-08!63;UBERON:0001015!3.31e-08!63;UBERON:0000383!3.31e-08!63;UBERON:0004290!6.23e-08!70;UBERON:0000486!2.00e-07!82;UBERON:0001009!2.62e-07!113;UBERON:0004535!6.43e-07!110;UBERON:0003076!9.68e-07!15;UBERON:0003057!9.68e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.17e-26;34!UBERON:0002020;8.17e-26;34!UBERON:0001893;8.61e-26;34!UBERON:0001869;1.68e-25;32!UBERON:0002791;5.17e-25;32!UBERON:0000956;2.52e-23;25!UBERON:0000203;2.52e-23;25!UBERON:0002780;3.14e-22;41!UBERON:0001890;3.14e-22;41!UBERON:0002619;2.53e-21;22!UBERON:0001950;4.21e-19;20!UBERON:0000073;4.71e-19;53!UBERON:0002616;4.71e-19;53!UBERON:0000955;4.49e-16;68!UBERON:0001017;4.24e-15;75!UBERON:0001016;3.04e-12;83!UBERON:0002420;5.80e-08;9!UBERON:0007245;5.80e-08;9!UBERON:0010009;5.80e-08;9!UBERON:0010011;5.80e-08;9!UBERON:0000454;5.80e-08;9!UBERON:0000125;1.41e-07;9!UBERON:0002308;1.41e-07;9!UBERON:0000200;1.78e-07;6!UBERON:0000349;2.79e-07;5!UBERON:0011216;8.61e-07;132 | |||
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| ||
|short_description=p3@SHISA4 | |||
}} | }} |
Latest revision as of 19:15, 19 September 2015
Short description: | p3@SHISA4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHISA4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -40bp_to_uc001gxa.2_5end |
EntrezGene: | SHISA4 |
HGNC: | 27139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data