FFCP PHASE1:Hg19::chr3:89156799..89156831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2042 | |EntrezGene=2042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3387 | |HGNC=3387 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXA2 | |UniProt=C9JXA2 | ||
|association_with_transcript=0bp_to_ENST00000452448,ENST00000494014_5end | |association_with_transcript=0bp_to_ENST00000452448,ENST00000494014_5end | ||
|cluster_id=chr3:89156799..89156831,+ | |||
|coexpression_cluster_id=C214 | |coexpression_cluster_id=C214 | ||
|description=CAGE_peak_3_at_EPHA3_5end | |description=CAGE_peak_3_at_EPHA3_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-27!115;UBERON:0000073!1.58e-20!94;UBERON:0001016!1.58e-20!94;UBERON:0001017!4.16e-20!82;UBERON:0005743!7.74e-20!86;UBERON:0001049!2.86e-18!57;UBERON:0005068!2.86e-18!57;UBERON:0006241!2.86e-18!57;UBERON:0007135!2.86e-18!57;UBERON:0002346!7.11e-16!90;UBERON:0000955!1.13e-15!69;UBERON:0006238!1.13e-15!69;UBERON:0003075!1.17e-15!86;UBERON:0007284!1.17e-15!86;UBERON:0002616!2.81e-15!59;UBERON:0000924!4.62e-15!173;UBERON:0006601!4.62e-15!173;UBERON:0003080!5.85e-15!42;UBERON:0004121!1.01e-14!169;UBERON:0002780!2.22e-14!41;UBERON:0001890!2.22e-14!41;UBERON:0006240!2.22e-14!41;UBERON:0001893!7.42e-14!34;UBERON:0002020!1.16e-13!34;UBERON:0003528!1.16e-13!34;UBERON:0001869!2.00e-13!32;UBERON:0002791!2.28e-13!33;UBERON:0001950!6.63e-12!20;UBERON:0000481!9.07e-12!347;UBERON:0000956!1.15e-11!25;UBERON:0000203!1.15e-11!25;UBERON:0000153!2.22e-11!129;UBERON:0007811!2.22e-11!129;UBERON:0002619!3.19e-11!22;UBERON:0000033!8.45e-11!123;UBERON:0000475!1.12e-10!365;UBERON:0003056!1.50e-10!61;UBERON:0000477!5.39e-09!286;UBERON:0004111!1.27e-08!241;UBERON:0000468!8.63e-08!659;UBERON:0000483!3.70e-07!309;UBERON:0000119!4.22e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!1.52e-27!115;UBERON:0000073!1.58e-20!94;UBERON:0001016!1.58e-20!94;UBERON:0001017!4.16e-20!82;UBERON:0005743!7.74e-20!86;UBERON:0001049!2.86e-18!57;UBERON:0005068!2.86e-18!57;UBERON:0006241!2.86e-18!57;UBERON:0007135!2.86e-18!57;UBERON:0002346!7.11e-16!90;UBERON:0000955!1.13e-15!69;UBERON:0006238!1.13e-15!69;UBERON:0003075!1.17e-15!86;UBERON:0007284!1.17e-15!86;UBERON:0002616!2.81e-15!59;UBERON:0000924!4.62e-15!173;UBERON:0006601!4.62e-15!173;UBERON:0003080!5.85e-15!42;UBERON:0004121!1.01e-14!169;UBERON:0002780!2.22e-14!41;UBERON:0001890!2.22e-14!41;UBERON:0006240!2.22e-14!41;UBERON:0001893!7.42e-14!34;UBERON:0002020!1.16e-13!34;UBERON:0003528!1.16e-13!34;UBERON:0001869!2.00e-13!32;UBERON:0002791!2.28e-13!33;UBERON:0001950!6.63e-12!20;UBERON:0000481!9.07e-12!347;UBERON:0000956!1.15e-11!25;UBERON:0000203!1.15e-11!25;UBERON:0000153!2.22e-11!129;UBERON:0007811!2.22e-11!129;UBERON:0002619!3.19e-11!22;UBERON:0000033!8.45e-11!123;UBERON:0000475!1.12e-10!365;UBERON:0003056!1.50e-10!61;UBERON:0000477!5.39e-09!286;UBERON:0004111!1.27e-08!241;UBERON:0000468!8.63e-08!659;UBERON:0000483!3.70e-07!309;UBERON:0000119!4.22e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.12e-11;20!UBERON:0002619;3.12e-10;22!UBERON:0000956;1.35e-09;25!UBERON:0000203;1.35e-09;25!UBERON:0000922;2.81e-09;49!UBERON:0001869;9.96e-08;32!UBERON:0002791;5.08e-07;32!UBERON:0001893;5.44e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0001950;1.12e-11;20!UBERON:0002619;3.12e-10;22!UBERON:0000956;1.35e-09;25!UBERON:0000203;1.35e-09;25!UBERON:0000922;2.81e-09;49!UBERON:0001869;9.96e-08;32!UBERON:0002791;5.08e-07;32!UBERON:0001893;5.44e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.93e-15,114;UBERON:0001950,9.25e-12,20;UBERON:0011216,2.75e-11,223;UBERON:0002619,2.62e-10,22;UBERON:0000956,1.33e-09,25;UBERON:0000203,1.33e-09,25;UBERON:0001016,3.61e-09,89;UBERON:0001017,8.07e-09,81;UBERON:0001869,1.85e-08,32;UBERON:0001893,1.13e-07,34;UBERON:0002791,1.72e-07,32;UBERON:0001049,4.75e-07,56;UBERON:0005068,4.75e-07,56;UBERON:0006241,4.75e-07,56;UBERON:0007135,4.75e-07,56;UBERON:0003528,8.77e-07,34;UBERON:0002020,8.77e-07,34 | |||
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| ||
|short_description=p3@EPHA3 | |short_description=p3@EPHA3 | ||
}} | }} |
Latest revision as of 19:22, 19 September 2015
Short description: | p3@EPHA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPHA3_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 0bp_to_ENST00000452448, ENST00000494014_5end |
EntrezGene: | EPHA3 |
HGNC: | 3387 |
UniProt: | C9JXA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.93e-15 | 114 |
neocortex | 9.25e-12 | 20 |
organ system subdivision | 2.75e-11 | 223 |
regional part of cerebral cortex | 2.62e-10 | 22 |
cerebral cortex | 1.33e-09 | 25 |
pallium | 1.33e-09 | 25 |
nervous system | 3.61e-09 | 89 |
central nervous system | 8.07e-09 | 81 |
cerebral hemisphere | 1.85e-08 | 32 |
telencephalon | 1.13e-07 | 34 |
regional part of telencephalon | 1.72e-07 | 32 |
neural tube | 4.75e-07 | 56 |
neural rod | 4.75e-07 | 56 |
future spinal cord | 4.75e-07 | 56 |
neural keel | 4.75e-07 | 56 |
brain grey matter | 8.77e-07 | 34 |
gray matter | 8.77e-07 | 34 |