FFCP PHASE1:Hg19::chr18:5197646..5197692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=642597 | |EntrezGene=642597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28285 | |HGNC=28285 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW23 | |UniProt=P0CW23 | ||
|association_with_transcript=-391bp_to_ENST00000434239,NM_001145194,uc010wzc.1_5end | |association_with_transcript=-391bp_to_ENST00000434239,NM_001145194,uc010wzc.1_5end | ||
|cluster_id=chr18:5197646..5197692,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_1_at_C18orf42_5end | |description=CAGE_peak_1_at_C18orf42_5end | ||
|id=chr18:5197646..5197692,- | |id=chr18:5197646..5197692,- | ||
|ontology_enrichment_celltype=CL:0000242!4.12e-08!2 | |ontology_enrichment_celltype=CL:0000242!4.12e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.63e-18;2!CL:0000242;1.63e-18;2!CL:0002553;2.84e-10;1!CL:0000312;5.99e-08;5!CL:0000240;9.28e-07;6!CL:0000311;9.28e-07;6!CL:0000079;9.28e-07;6!CL:0000237;9.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.20e-18,2;CL:0002553,3.10e-10,1;CL:0000312,5.31e-08,5;CL:0000240,8.39e-07,6;CL:0000311,8.39e-07,6;CL:0000079,8.39e-07,6;CL:0000237,8.39e-07,6;CL:0000036,8.39e-07,6;CL:0000357,8.39e-07,6;CL:0000114,8.39e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.80e-28;3!UBERON:0006222;7.88e-10;1!UBERON:0006601;1.32e-09;82!CL:0000357;9.28e-07;6!CL:0000114;9.28e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.33e-89!57;UBERON:0005068!3.33e-89!57;UBERON:0006241!3.33e-89!57;UBERON:0007135!3.33e-89!57;UBERON:0002616!1.55e-81!59;UBERON:0000955!2.95e-78!69;UBERON:0006238!2.95e-78!69;UBERON:0001017!3.89e-78!82;UBERON:0005743!2.13e-77!86;UBERON:0002780!2.40e-75!41;UBERON:0001890!2.40e-75!41;UBERON:0006240!2.40e-75!41;UBERON:0003080!2.19e-73!42;UBERON:0000073!1.56e-72!94;UBERON:0001016!1.56e-72!94;UBERON:0003075!4.16e-68!86;UBERON:0007284!4.16e-68!86;UBERON:0002346!1.30e-64!90;UBERON:0002020!5.10e-59!34;UBERON:0003528!5.10e-59!34;UBERON:0001893!6.99e-59!34;UBERON:0001869!2.44e-58!32;UBERON:0003056!7.40e-58!61;UBERON:0002619!2.13e-56!22;UBERON:0002791!4.99e-56!33;UBERON:0007023!1.48e-53!115;UBERON:0001950!3.25e-50!20;UBERON:0000956!3.15e-49!25;UBERON:0000203!3.15e-49!25;UBERON:0000033!4.53e-46!123;UBERON:0000153!1.97e-43!129;UBERON:0007811!1.97e-43!129;UBERON:0004121!2.37e-41!169;UBERON:0000924!3.93e-40!173;UBERON:0006601!3.93e-40!173;UBERON:0000025!7.55e-23!194;UBERON:0000200!1.39e-18!6;UBERON:0004111!2.32e-18!241;UBERON:0001871!3.02e-18!7;UBERON:0001894!1.03e-17!7;UBERON:0006222!1.03e-17!7;UBERON:0004733!5.96e-17!12;UBERON:0002028!5.96e-17!12;UBERON:0007277!5.96e-17!12;UBERON:0003076!1.13e-16!15;UBERON:0003057!1.13e-16!15;UBERON:0001872!2.17e-16!5;UBERON:0000349!5.31e-16!5;UBERON:0004732!1.56e-15!13;UBERON:0000477!1.64e-15!286;UBERON:0000483!1.89e-15!309;UBERON:0000119!3.45e-15!312;UBERON:0003296!1.41e-14!4;UBERON:0010133!1.41e-14!4;UBERON:0000475!2.41e-14!365;UBERON:0000064!2.88e-13!219;UBERON:0002680!3.83e-13!9;UBERON:0001895!3.83e-13!9;UBERON:0010092!3.83e-13!9;UBERON:0002308!1.57e-11!9;UBERON:0000125!1.57e-11!9;UBERON:0002420!1.73e-11!9;UBERON:0007245!1.73e-11!9;UBERON:0010009!1.73e-11!9;UBERON:0010011!1.73e-11!9;UBERON:0000454!1.73e-11!9;UBERON:0002021!1.24e-10!5;UBERON:0000988!3.21e-10!3;UBERON:0002298!4.61e-10!8;UBERON:0002771!6.85e-10!3;UBERON:0000481!2.85e-09!347;UBERON:0000062!1.93e-08!511;UBERON:0001905!3.47e-08!2;UBERON:0002757!3.47e-08!2;UBERON:0010134!3.47e-08!2;UBERON:0002784!3.47e-08!2;UBERON:0005408!3.47e-08!2;UBERON:0001899!3.47e-08!2;UBERON:0000007!4.41e-08!2;UBERON:0001954!7.31e-08!2;UBERON:0003022!7.31e-08!2;UBERON:0002421!7.31e-08!2;UBERON:0002600!7.31e-08!2;UBERON:0001870!2.03e-07!2;UBERON:0002148!2.79e-07!2;UBERON:0009662!2.79e-07!2;UBERON:0000369!3.18e-07!4;UBERON:0002435!3.18e-07!4;UBERON:0000204!3.18e-07!4;UBERON:0010082!3.18e-07!4;UBERON:0001876!3.28e-07!2;UBERON:0000922!3.69e-07!612;UBERON:0009663!6.61e-07!7;UBERON:0000923!7.97e-07!604;UBERON:0005291!7.97e-07!604;UBERON:0006598!7.97e-07!604;UBERON:0002532!7.97e-07!604;UBERON:0002050!8.61e-07!605;UBERON:0005423!8.61e-07!605;UBERON:0000467!9.95e-07!625 | |ontology_enrichment_uberon=UBERON:0001049!3.33e-89!57;UBERON:0005068!3.33e-89!57;UBERON:0006241!3.33e-89!57;UBERON:0007135!3.33e-89!57;UBERON:0002616!1.55e-81!59;UBERON:0000955!2.95e-78!69;UBERON:0006238!2.95e-78!69;UBERON:0001017!3.89e-78!82;UBERON:0005743!2.13e-77!86;UBERON:0002780!2.40e-75!41;UBERON:0001890!2.40e-75!41;UBERON:0006240!2.40e-75!41;UBERON:0003080!2.19e-73!42;UBERON:0000073!1.56e-72!94;UBERON:0001016!1.56e-72!94;UBERON:0003075!4.16e-68!86;UBERON:0007284!4.16e-68!86;UBERON:0002346!1.30e-64!90;UBERON:0002020!5.10e-59!34;UBERON:0003528!5.10e-59!34;UBERON:0001893!6.99e-59!34;UBERON:0001869!2.44e-58!32;UBERON:0003056!7.40e-58!61;UBERON:0002619!2.13e-56!22;UBERON:0002791!4.99e-56!33;UBERON:0007023!1.48e-53!115;UBERON:0001950!3.25e-50!20;UBERON:0000956!3.15e-49!25;UBERON:0000203!3.15e-49!25;UBERON:0000033!4.53e-46!123;UBERON:0000153!1.97e-43!129;UBERON:0007811!1.97e-43!129;UBERON:0004121!2.37e-41!169;UBERON:0000924!3.93e-40!173;UBERON:0006601!3.93e-40!173;UBERON:0000025!7.55e-23!194;UBERON:0000200!1.39e-18!6;UBERON:0004111!2.32e-18!241;UBERON:0001871!3.02e-18!7;UBERON:0001894!1.03e-17!7;UBERON:0006222!1.03e-17!7;UBERON:0004733!5.96e-17!12;UBERON:0002028!5.96e-17!12;UBERON:0007277!5.96e-17!12;UBERON:0003076!1.13e-16!15;UBERON:0003057!1.13e-16!15;UBERON:0001872!2.17e-16!5;UBERON:0000349!5.31e-16!5;UBERON:0004732!1.56e-15!13;UBERON:0000477!1.64e-15!286;UBERON:0000483!1.89e-15!309;UBERON:0000119!3.45e-15!312;UBERON:0003296!1.41e-14!4;UBERON:0010133!1.41e-14!4;UBERON:0000475!2.41e-14!365;UBERON:0000064!2.88e-13!219;UBERON:0002680!3.83e-13!9;UBERON:0001895!3.83e-13!9;UBERON:0010092!3.83e-13!9;UBERON:0002308!1.57e-11!9;UBERON:0000125!1.57e-11!9;UBERON:0002420!1.73e-11!9;UBERON:0007245!1.73e-11!9;UBERON:0010009!1.73e-11!9;UBERON:0010011!1.73e-11!9;UBERON:0000454!1.73e-11!9;UBERON:0002021!1.24e-10!5;UBERON:0000988!3.21e-10!3;UBERON:0002298!4.61e-10!8;UBERON:0002771!6.85e-10!3;UBERON:0000481!2.85e-09!347;UBERON:0000062!1.93e-08!511;UBERON:0001905!3.47e-08!2;UBERON:0002757!3.47e-08!2;UBERON:0010134!3.47e-08!2;UBERON:0002784!3.47e-08!2;UBERON:0005408!3.47e-08!2;UBERON:0001899!3.47e-08!2;UBERON:0000007!4.41e-08!2;UBERON:0001954!7.31e-08!2;UBERON:0003022!7.31e-08!2;UBERON:0002421!7.31e-08!2;UBERON:0002600!7.31e-08!2;UBERON:0001870!2.03e-07!2;UBERON:0002148!2.79e-07!2;UBERON:0009662!2.79e-07!2;UBERON:0000369!3.18e-07!4;UBERON:0002435!3.18e-07!4;UBERON:0000204!3.18e-07!4;UBERON:0010082!3.18e-07!4;UBERON:0001876!3.28e-07!2;UBERON:0000922!3.69e-07!612;UBERON:0009663!6.61e-07!7;UBERON:0000923!7.97e-07!604;UBERON:0005291!7.97e-07!604;UBERON:0006598!7.97e-07!604;UBERON:0002532!7.97e-07!604;UBERON:0002050!8.61e-07!605;UBERON:0005423!8.61e-07!605;UBERON:0000467!9.95e-07!625 | ||
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|short_description=p1@C18orf42 | |short_description=p1@C18orf42 | ||
}} | }} |
Latest revision as of 19:53, 19 September 2015
Short description: | p1@C18orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C18orf42_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -391bp_to_ENST00000434239, NM_001145194, uc010wzc.1_5end |
EntrezGene: | C18orf42 |
HGNC: | 28285 |
UniProt: | P0CW23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.20e-18 | 2 |
lung fibroblast | 3.10e-10 | 1 |
keratinocyte | 5.31e-08 | 5 |
stratified squamous epithelial cell | 8.39e-07 | 6 |
keratin accumulating cell | 8.39e-07 | 6 |
stratified epithelial cell | 8.39e-07 | 6 |
keratinizing barrier epithelial cell | 8.39e-07 | 6 |
epithelial fate stem cell | 8.39e-07 | 6 |
stratified epithelial stem cell | 8.39e-07 | 6 |
surface ectodermal cell | 8.39e-07 | 6 |