FFCP PHASE1:Hg19::chr6:111136558..111136602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23097 | |EntrezGene=23097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19338 | |HGNC=19338 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWU1 | |UniProt=Q9BWU1 | ||
|association_with_transcript=-39bp_to_ENST00000368911_5end | |association_with_transcript=-39bp_to_ENST00000368911_5end | ||
|cluster_id=chr6:111136558..111136602,- | |||
|description=CAGE_peak_2_at_CDK19_5end | |description=CAGE_peak_2_at_CDK19_5end | ||
|id=chr6:111136558..111136602,- | |id=chr6:111136558..111136602,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.87e-30!115;UBERON:0001049!1.40e-17!57;UBERON:0005068!1.40e-17!57;UBERON:0006241!1.40e-17!57;UBERON:0007135!1.40e-17!57;UBERON:0001017!1.26e-14!82;UBERON:0000955!1.34e-14!69;UBERON:0006238!1.34e-14!69;UBERON:0002616!2.24e-14!59;UBERON:0003080!2.32e-14!42;UBERON:0000073!3.74e-14!94;UBERON:0001016!3.74e-14!94;UBERON:0005743!7.20e-14!86;UBERON:0002780!8.57e-14!41;UBERON:0001890!8.57e-14!41;UBERON:0006240!8.57e-14!41;UBERON:0002346!7.50e-13!90;UBERON:0003075!1.71e-12!86;UBERON:0007284!1.71e-12!86;UBERON:0001893!2.22e-12!34;UBERON:0002020!2.69e-12!34;UBERON:0003528!2.69e-12!34;UBERON:0002791!5.50e-12!33;UBERON:0001869!3.43e-11!32;UBERON:0003056!1.12e-09!61;UBERON:0002619!6.44e-08!22;UBERON:0001950!6.47e-08!20;UBERON:0000956!6.51e-08!25;UBERON:0000203!6.51e-08!25;UBERON:0000153!8.74e-08!129;UBERON:0007811!8.74e-08!129 | |ontology_enrichment_uberon=UBERON:0007023!3.87e-30!115;UBERON:0001049!1.40e-17!57;UBERON:0005068!1.40e-17!57;UBERON:0006241!1.40e-17!57;UBERON:0007135!1.40e-17!57;UBERON:0001017!1.26e-14!82;UBERON:0000955!1.34e-14!69;UBERON:0006238!1.34e-14!69;UBERON:0002616!2.24e-14!59;UBERON:0003080!2.32e-14!42;UBERON:0000073!3.74e-14!94;UBERON:0001016!3.74e-14!94;UBERON:0005743!7.20e-14!86;UBERON:0002780!8.57e-14!41;UBERON:0001890!8.57e-14!41;UBERON:0006240!8.57e-14!41;UBERON:0002346!7.50e-13!90;UBERON:0003075!1.71e-12!86;UBERON:0007284!1.71e-12!86;UBERON:0001893!2.22e-12!34;UBERON:0002020!2.69e-12!34;UBERON:0003528!2.69e-12!34;UBERON:0002791!5.50e-12!33;UBERON:0001869!3.43e-11!32;UBERON:0003056!1.12e-09!61;UBERON:0002619!6.44e-08!22;UBERON:0001950!6.47e-08!20;UBERON:0000956!6.51e-08!25;UBERON:0000203!6.51e-08!25;UBERON:0000153!8.74e-08!129;UBERON:0007811!8.74e-08!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.21e-11;41!UBERON:0001890;3.21e-11;41!UBERON:0001893;4.92e-11;34!UBERON:0003528;1.07e-10;34!UBERON:0002020;1.07e-10;34!UBERON:0002791;1.15e-10;32!UBERON:0001869;1.92e-10;32!UBERON:0000073;4.24e-10;53!UBERON:0002616;4.24e-10;53!UBERON:0007023;1.52e-09;114!UBERON:0000956;6.58e-08;25!UBERON:0000203;6.58e-08;25!UBERON:0001950;7.41e-08;20!UBERON:0002619;1.21e-07;22!UBERON:0000955;7.37e-07;68!UBERON:0000125;7.62e-07;9!UBERON:0002308;7.62e-07;9!UBERON:0001017;8.08e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.15e-32,114;UBERON:0001049,3.44e-17,56;UBERON:0005068,3.44e-17,56;UBERON:0006241,3.44e-17,56;UBERON:0007135,3.44e-17,56;UBERON:0000073,1.07e-15,53;UBERON:0002616,1.07e-15,53;UBERON:0002780,4.28e-14,41;UBERON:0001890,4.28e-14,41;UBERON:0003080,4.28e-14,41;UBERON:0006240,4.28e-14,41;UBERON:0000955,3.66e-13,68;UBERON:0006238,3.66e-13,68;UBERON:0001017,8.90e-13,81;UBERON:0002346,8.95e-13,86;UBERON:0001016,1.15e-12,89;UBERON:0003075,1.58e-12,82;UBERON:0007284,1.58e-12,82;UBERON:0001893,1.70e-12,34;UBERON:0003528,2.09e-12,34;UBERON:0002020,2.09e-12,34;UBERON:0002791,2.02e-11,32;UBERON:0001869,3.33e-11,32;UBERON:0003056,7.37e-10,61;UBERON:0001950,7.95e-08,20;UBERON:0000956,1.19e-07,25;UBERON:0000203,1.19e-07,25;UBERON:0002619,1.34e-07,22;UBERON:0010371,2.89e-07,104;UBERON:0011216,7.91e-07,223;UBERON:0000125,9.42e-07,9;UBERON:0002308,9.42e-07,9 | |||
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| ||
|short_description=p2@CDK19 | |short_description=p2@CDK19 | ||
}} | }} |
Latest revision as of 20:07, 19 September 2015
Short description: | p2@CDK19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDK19_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000368911_5end |
EntrezGene: | CDK19 |
HGNC: | 19338 |
UniProt: | Q9BWU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.15e-32 | 114 |
neural tube | 3.44e-17 | 56 |
neural rod | 3.44e-17 | 56 |
future spinal cord | 3.44e-17 | 56 |
neural keel | 3.44e-17 | 56 |
regional part of nervous system | 1.07e-15 | 53 |
regional part of brain | 1.07e-15 | 53 |
regional part of forebrain | 4.28e-14 | 41 |
forebrain | 4.28e-14 | 41 |
anterior neural tube | 4.28e-14 | 41 |
future forebrain | 4.28e-14 | 41 |
brain | 3.66e-13 | 68 |
future brain | 3.66e-13 | 68 |
central nervous system | 8.90e-13 | 81 |
neurectoderm | 8.95e-13 | 86 |
nervous system | 1.15e-12 | 89 |
neural plate | 1.58e-12 | 82 |
presumptive neural plate | 1.58e-12 | 82 |
telencephalon | 1.70e-12 | 34 |
brain grey matter | 2.09e-12 | 34 |
gray matter | 2.09e-12 | 34 |
regional part of telencephalon | 2.02e-11 | 32 |
cerebral hemisphere | 3.33e-11 | 32 |
pre-chordal neural plate | 7.37e-10 | 61 |
neocortex | 7.95e-08 | 20 |
cerebral cortex | 1.19e-07 | 25 |
pallium | 1.19e-07 | 25 |
regional part of cerebral cortex | 1.34e-07 | 22 |
ecto-epithelium | 2.89e-07 | 104 |
organ system subdivision | 7.91e-07 | 223 |
neural nucleus | 9.42e-07 | 9 |
nucleus of brain | 9.42e-07 | 9 |