FFCP PHASE1:Hg19::chr7:856246..856289,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:856246..856289,+ to FFCP PHASE1:Hg19::chr7:856246..856289,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23353 | |EntrezGene=23353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18587 | |HGNC=18587 | ||
|TSSclassifier=strong | |||
|UniProt=O94901,C9JK55,C9JR15,E9PDU4,F8WD13,B4DZF7 | |UniProt=O94901,C9JK55,C9JR15,E9PDU4,F8WD13,B4DZF7 | ||
|association_with_transcript=0bp_to_ENST00000389574,ENST00000427969,ENST00000435699,ENST00000440380,ENST00000450538,ENST00000452783,ENST00000457378,NM_001171944,NM_001171945,NM_025154,uc003sje.1,uc003sjf.2,uc010ksa.1,uc011jvp.1,uc011jvq.1_5end | |||
|cluster_id=chr7:856246..856289,+ | |||
|description=CAGE_peak_1_at_SUN1_5end | |||
|id=chr7:856246..856289,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.47e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.47e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!2.37e-18!173;UBERON:0006601!2.37e-18!173;UBERON:0004121!5.21e-17!169;UBERON:0002346!1.23e-15!90;UBERON:0000073!2.86e-15!94;UBERON:0001016!2.86e-15!94;UBERON:0001049!3.96e-15!57;UBERON:0005068!3.96e-15!57;UBERON:0006241!3.96e-15!57;UBERON:0007135!3.96e-15!57;UBERON:0007023!2.00e-14!115;UBERON:0003075!3.28e-14!86;UBERON:0007284!3.28e-14!86;UBERON:0001017!8.51e-14!82;UBERON:0002616!1.06e-13!59;UBERON:0000955!1.14e-13!69;UBERON:0006238!1.14e-13!69;UBERON:0005743!1.99e-13!86;UBERON:0000033!1.34e-12!123;UBERON:0000153!3.61e-12!129;UBERON:0007811!3.61e-12!129;UBERON:0003080!1.13e-11!42;UBERON:0000064!1.30e-11!219;UBERON:0002780!2.34e-11!41;UBERON:0001890!2.34e-11!41;UBERON:0006240!2.34e-11!41;UBERON:0000475!3.86e-10!365;UBERON:0000062!2.32e-09!511;UBERON:0003056!2.52e-09!61;UBERON:0001893!3.52e-09!34;UBERON:0002791!4.69e-09!33;UBERON:0004111!5.89e-09!241;UBERON:0001869!6.47e-09!32;UBERON:0002020!1.31e-08!34;UBERON:0003528!1.31e-08!34;UBERON:0000481!2.74e-08!347;UBERON:0000464!9.69e-08!104;UBERON:0000025!1.03e-07!194;UBERON:0002619!1.18e-07!22;UBERON:0000468!1.53e-07!659;UBERON:0000956!1.86e-07!25;UBERON:0000203!1.86e-07!25;UBERON:0000119!2.45e-07!312;UBERON:0001950!3.00e-07!20;UBERON:0000477!4.29e-07!286;UBERON:0000483!4.96e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.31e-08;41!UBERON:0001890;1.31e-08;41!UBERON:0001869;2.24e-08;32!UBERON:0002791;3.61e-08;32!UBERON:0001893;3.66e-08;34!UBERON:0000073;4.04e-08;53!UBERON:0002616;4.04e-08;53!UBERON:0003528;8.62e-08;34!UBERON:0002020;8.62e-08;34!UBERON:0002619;1.13e-07;22!UBERON:0000956;1.90e-07;25!UBERON:0000203;1.90e-07;25!UBERON:0001950;2.80e-07;20!UBERON:0000922;3.16e-07;49!UBERON:0000955;5.07e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.64e-17,171;UBERON:0000924,3.64e-17,171;UBERON:0006601,3.64e-17,171;UBERON:0001016,2.44e-15,89;UBERON:0001049,8.36e-15,56;UBERON:0005068,8.36e-15,56;UBERON:0006241,8.36e-15,56;UBERON:0007135,8.36e-15,56;UBERON:0002346,2.12e-14,86;UBERON:0007023,2.43e-14,114;UBERON:0000073,5.27e-14,53;UBERON:0002616,5.27e-14,53;UBERON:0001017,1.71e-13,81;UBERON:0011216,2.08e-13,223;UBERON:0000955,2.33e-13,68;UBERON:0006238,2.33e-13,68;UBERON:0003075,5.28e-13,82;UBERON:0007284,5.28e-13,82;UBERON:0002780,2.34e-11,41;UBERON:0001890,2.34e-11,41;UBERON:0003080,2.34e-11,41;UBERON:0006240,2.34e-11,41;UBERON:0010371,7.90e-10,104;UBERON:0010314,2.45e-09,132;UBERON:0001893,3.52e-09,34;UBERON:0004111,5.46e-09,240;UBERON:0003056,5.57e-09,61;UBERON:0001869,6.47e-09,32;UBERON:0002791,9.82e-09,32;UBERON:0003528,1.31e-08,34;UBERON:0002020,1.31e-08,34;UBERON:0002619,1.18e-07,22;UBERON:0000025,1.81e-07,192;UBERON:0000956,1.86e-07,25;UBERON:0000203,1.86e-07,25;UBERON:0001950,3.00e-07,20 | |||
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| ||
|short_description=p1@SUN1 | |||
}} | }} |
Latest revision as of 20:24, 19 September 2015
Short description: | p1@SUN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389574, ENST00000427969, ENST00000435699, ENST00000440380, ENST00000450538, ENST00000452783, ENST00000457378, NM_001171944, NM_001171945, NM_025154, uc003sje.1, uc003sjf.2, uc010ksa.1, uc011jvp.1, uc011jvq.1_5end |
EntrezGene: | SUN1 |
HGNC: | 18587 |
UniProt: | O94901C9JK55C9JR15E9PDU4F8WD13B4DZF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.47e-09 | 143 |