FFCP PHASE1:Hg19::chr18:52989001..52989030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_uc002lfw.3_5end | |association_with_transcript=5bp_to_uc002lfw.3_5end | ||
|cluster_id=chr18:52989001..52989030,- | |||
|coexpression_cluster_id=C2464 | |coexpression_cluster_id=C2464 | ||
|description=CAGE_peak_10_at_TCF4_5end | |description=CAGE_peak_10_at_TCF4_5end | ||
|id=chr18:52989001..52989030,- | |id=chr18:52989001..52989030,- | ||
|ontology_enrichment_celltype=CL:0000945;3.95e-21;24!CL:0000236;6.62e-12;13 | |ontology_enrichment_celltype=CL:0000945!1.07e-15!24;CL:0000826!1.07e-15!24;CL:0000236!7.67e-10!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;3.95e-21;24!CL:0000236;6.62e-12;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.16e-21,24;CL:0000826,5.16e-21,24;CL:0000236,7.08e-13,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.54e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;2.62e-17;22!UBERON:0000956;9.15e-16;25!UBERON:0000203;9.15e-16;25!UBERON:0001950;1.33e-15;20!UBERON:0001893;2.04e-15;34!UBERON:0001869;7.94e-15;32!UBERON:0002791;8.75e-15;32!UBERON:0002780;2.16e-14;41!UBERON:0001890;2.16e-14;41!UBERON:0003528;2.83e-14;34!UBERON:0002020;2.83e-14;34!UBERON:0000073;7.81e-13;53!UBERON:0002616;7.81e-13;53!UBERON:0001016;1.63e-09;83!UBERON:0001017;6.42e-09;75!UBERON:0007023;2.76e-08;114!UBERON:0000955;2.85e-08;68 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-25!115;UBERON:0000073!1.05e-21!94;UBERON:0001016!1.05e-21!94;UBERON:0001017!2.18e-21!82;UBERON:0005743!5.88e-20!86;UBERON:0001049!3.74e-19!57;UBERON:0005068!3.74e-19!57;UBERON:0006241!3.74e-19!57;UBERON:0007135!3.74e-19!57;UBERON:0002616!9.06e-19!59;UBERON:0000955!6.27e-18!69;UBERON:0006238!6.27e-18!69;UBERON:0003080!1.11e-17!42;UBERON:0002780!3.01e-17!41;UBERON:0001890!3.01e-17!41;UBERON:0006240!3.01e-17!41;UBERON:0000924!1.54e-15!173;UBERON:0006601!1.54e-15!173;UBERON:0001893!6.92e-15!34;UBERON:0002020!1.54e-14!34;UBERON:0003528!1.54e-14!34;UBERON:0004121!1.92e-14!169;UBERON:0002791!2.25e-14!33;UBERON:0002346!4.32e-14!90;UBERON:0001869!4.79e-14!32;UBERON:0000956!3.47e-13!25;UBERON:0000203!3.47e-13!25;UBERON:0003075!6.63e-13!86;UBERON:0007284!6.63e-13!86;UBERON:0002619!8.14e-13!22;UBERON:0001950!1.23e-11!20;UBERON:0000153!5.30e-11!129;UBERON:0007811!5.30e-11!129;UBERON:0000033!1.35e-10!123;UBERON:0003056!1.96e-10!61;UBERON:0000479!1.20e-08!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.62e-17;22!UBERON:0000956;9.15e-16;25!UBERON:0000203;9.15e-16;25!UBERON:0001950;1.33e-15;20!UBERON:0001893;2.04e-15;34!UBERON:0001869;7.94e-15;32!UBERON:0002791;8.75e-15;32!UBERON:0002780;2.16e-14;41!UBERON:0001890;2.16e-14;41!UBERON:0003528;2.83e-14;34!UBERON:0002020;2.83e-14;34!UBERON:0000073;7.81e-13;53!UBERON:0002616;7.81e-13;53!UBERON:0001016;1.63e-09;83!UBERON:0001017;6.42e-09;75!UBERON:0007023;2.76e-08;114!UBERON:0000955;2.85e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.24e-30,114;UBERON:0001016,8.36e-25,89;UBERON:0001017,3.14e-23,81;UBERON:0001049,1.90e-22,56;UBERON:0005068,1.90e-22,56;UBERON:0006241,1.90e-22,56;UBERON:0007135,1.90e-22,56;UBERON:0000073,6.93e-21,53;UBERON:0002616,6.93e-21,53;UBERON:0002780,5.30e-20,41;UBERON:0001890,5.30e-20,41;UBERON:0003080,5.30e-20,41;UBERON:0006240,5.30e-20,41;UBERON:0001893,3.04e-18,34;UBERON:0000955,4.55e-18,68;UBERON:0006238,4.55e-18,68;UBERON:0002346,1.22e-17,86;UBERON:0002619,1.46e-17,22;UBERON:0001869,5.62e-17,32;UBERON:0002791,7.08e-17,32;UBERON:0003528,8.99e-17,34;UBERON:0002020,8.99e-17,34;UBERON:0004121,1.76e-16,171;UBERON:0000924,1.76e-16,171;UBERON:0006601,1.76e-16,171;UBERON:0003075,3.55e-16,82;UBERON:0007284,3.55e-16,82;UBERON:0000956,5.38e-16,25;UBERON:0000203,5.38e-16,25;UBERON:0001950,9.21e-16,20;UBERON:0010371,1.52e-14,104;UBERON:0010314,2.66e-13,132;UBERON:0003056,2.34e-12,61;UBERON:0011216,1.04e-08,223 | |||
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| ||
|short_description=p10@TCF4 | |short_description=p10@TCF4 | ||
}} | }} |
Latest revision as of 20:38, 19 September 2015
Short description: | p10@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TCF4_5end |
Coexpression cluster: | C2464_lymphoma_acute_occipital_Neurons_cerebellum_small_parietal |
Association with transcript: | 5bp_to_uc002lfw.3_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.16e-21 | 24 |
pro-B cell | 5.16e-21 | 24 |
B cell | 7.08e-13 | 14 |