FFCP PHASE1:Hg19::chr19:54466179..54466202,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59283 | |EntrezGene=59283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13628 | |HGNC=13628 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXS5 | |UniProt=Q8WXS5 | ||
|association_with_transcript=-87bp_to_NM_031895_5end | |association_with_transcript=-87bp_to_NM_031895_5end | ||
|cluster_id=chr19:54466179..54466202,+ | |||
|coexpression_cluster_id=C100 | |coexpression_cluster_id=C100 | ||
|description=CAGE_peak_1_at_CACNG8_5end | |description=CAGE_peak_1_at_CACNG8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!2.98e-09!5 | |ontology_enrichment_celltype=CL:0002322!2.98e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002591;3.34e-66;1!CL:0000540;2.59e-12;6!CL:0000404;2.59e-12;6 | |ontology_enrichment_celltype_v019=CL:0002591;3.34e-66;1!CL:0000540;2.59e-12;6!CL:0000404;2.59e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.66e-66,1;CL:0000540,2.45e-12,6;CL:0000031,2.45e-12,6;CL:0000404,2.45e-12,6;CL:0000047,1.35e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.59e-12;6 | |ontology_enrichment_development_v019=CL:0000031;2.59e-12;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@CACNG8 | |short_description=p1@CACNG8 | ||
}} | }} |
Latest revision as of 20:42, 19 September 2015
Short description: | p1@CACNG8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNG8_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -87bp_to_NM_031895_5end |
EntrezGene: | CACNG8 |
HGNC: | 13628 |
UniProt: | Q8WXS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.66e-66 | 1 |
neuron | 2.45e-12 | 6 |
neuroblast | 2.45e-12 | 6 |
electrically signaling cell | 2.45e-12 | 6 |
neuronal stem cell | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.05e-34 | 2 |
developing epithelial placode | 7.05e-34 | 2 |
respiratory system arterial blood vessel | 7.05e-34 | 2 |
respiratory system blood vessel | 7.05e-34 | 2 |
respiratory system artery | 7.05e-34 | 2 |
head blood vessel | 7.05e-34 | 2 |
pulmonary artery | 7.05e-34 | 2 |
pulmonary vascular system | 7.05e-34 | 2 |
pharyngeal vasculature | 7.05e-34 | 2 |
truncus arteriosus | 7.05e-34 | 2 |
aortic sac | 7.05e-34 | 2 |
pharyngeal arch artery | 7.05e-34 | 2 |
outflow tract | 4.09e-23 | 3 |
heart blood vessel | 1.83e-14 | 5 |
coronary vessel | 1.83e-14 | 5 |
protuberance | 2.74e-12 | 6 |
pharyngeal arch | 2.74e-12 | 6 |
pharyngeal epithelium | 2.74e-12 | 6 |
embryonic head | 2.74e-12 | 6 |
simple columnar epithelium | 1.21e-08 | 9 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |